Failed Reason

Failed to install dependency package :
------------------------------------------------
[+] /usr (external bzip2-1.0.6-pkyqs6czmr636ktska3fpjek77reodry)
[+] /usr (external freetype-2.9.1-dwvapggh55qh4fl64dvaxm2ht5fauxe5)
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/gnuconfig-2021-08-14-ezyvb3gy7i726n45kwb44a4vxle3if3i
[+] /usr (external gnutls-3.6.14-am5d4tfzb22n5gtcbbngvqmlan67pedv)
[+] /usr (external libpng-1.6.34-heedxfzojpqtiev7bmm3u2nkfuqztjea)
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/lmdb-0.9.29-q3rg5yqhxwzwtekiv2iposqnxo5q2sos
[+] /usr (external pcre-8.42-ubt55iodsyy4jsmwgjpm7otqpdrrpgt2)
[+] /usr (external perl-5.26.3-cfeod657avcbjzlstrxizeulrdfnqb3r)
[+] /vol0003/rccs-sdt/a01008/opt/python/3.9.9/fj (external python-3.9.9-3wcip6atrybofsb566d7pjqwhl76u4dp)
[+] /usr (external zlib-1.2.11-o3hvygtdcp6vg3bpvsrurq4hgklwtype)
==> Installing dialign-tx-1.0.2-qcm23cmrt5uprn5ip7t46ewkf54nsr4q
==> No binary for dialign-tx-1.0.2-qcm23cmrt5uprn5ip7t46ewkf54nsr4q found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/fb/fb3940a48a12875332752a298f619f0da62593189cd257d28932463c7cebcb8f.tar.gz
==> No patches needed for dialign-tx
==> dialign-tx: Executing phase: 'edit'
==> dialign-tx: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16'

10 errors found in build log:
80 1 warning generated.
81 rm -f ./museq
82 /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/lib/spack
/env/fj/fcc -o ./museq \
83 ./museq.o ./parameters.o ./io.o ./diag.o ./alig.o ./assemble.o ./pro
b.o ./orf.o ./translate.o \
84 -pipe -Wall -lm
85 ./diag.o: In function `find_all_diags':
>> 86 /vol0003/rccs-sdt/a01008/spack-stage/spack-stage-dialign-tx-1.0.2-qc
m23cmrt5uprn5ip7t46ewkf54nsr4q/spack-src/source/diag.c:1845: undefin
ed reference to `find_diags_dialign'
>> 87 /vol0003/rccs-sdt/a01008/spack-stage/spack-stage-dialign-tx-1.0.2-qc
m23cmrt5uprn5ip7t46ewkf54nsr4q/spack-src/source/diag.c:1913: undefin
ed reference to `calc_ov_weight'
88 ./diag.o: In function `old_find_all_diags':
>> 89 /vol0003/rccs-sdt/a01008/spack-stage/spack-stage-dialign-tx-1.0.2-qc
m23cmrt5uprn5ip7t46ewkf54nsr4q/spack-src/source/diag.c:1997: undefin
ed reference to `find_diags_dialign'
>> 90 /vol0003/rccs-sdt/a01008/spack-stage/spack-stage-dialign-tx-1.0.2-qc
m23cmrt5uprn5ip7t46ewkf54nsr4q/spack-src/source/diag.c:2100: undefin
ed reference to `calc_ov_weight'
91 ./assemble.o: In function `simple_aligner':
>> 92 /vol0003/rccs-sdt/a01008/spack-stage/spack-stage-dialign-tx-1.0.2-qc
m23cmrt5uprn5ip7t46ewkf54nsr4q/spack-src/source/assemble.c:476: unde
fined reference to `calc_weight'
>> 93 /vol0003/rccs-sdt/a01008/spack-stage/spack-stage-dialign-tx-1.0.2-qc
m23cmrt5uprn5ip7t46ewkf54nsr4q/spack-src/source/assemble.c:459: unde
fined reference to `calc_weight'
>> 94 /vol0003/rccs-sdt/a01008/spack-stage/spack-stage-dialign-tx-1.0.2-qc
m23cmrt5uprn5ip7t46ewkf54nsr4q/spack-src/source/assemble.c:532: unde
fined reference to `align_diag'
95 ./assemble.o: In function `guided_aligner_rec':
>> 96 /vol0003/rccs-sdt/a01008/spack-stage/spack-stage-dialign-tx-1.0.2-qc
m23cmrt5uprn5ip7t46ewkf54nsr4q/spack-src/source/assemble.c:1128: und
efined reference to `confl_diag'
>> 97 /vol0003/rccs-sdt/a01008/spack-stage/spack-stage-dialign-tx-1.0.2-qc
m23cmrt5uprn5ip7t46ewkf54nsr4q/spack-src/source/assemble.c:1128: und
efined reference to `confl_diag'
>> 98 clang-7: error: linker command failed with exit code 1 (use -v to se
e invocation)
99 make: *** [Makefile:36: museq] Error 1

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-dialign-tx-1.0.2-qcm23cmrt5uprn5ip7t46ewkf54nsr4q/spack-build-out.txt

[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/mafft-7.481-2u6cubgm54umqommxi6gt6giavrxgdho
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/muscle-3.8.1551-tvrr74t3jcegf45atamyvcdnm5ehnsbk
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/pcma-2.0-fg2awieh2jnkem5swpvp4whfhsbrsslf
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/poamsa-2.0-ykju2lmimjdn5vcd75a6nzgxukfexs5s
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/probconsrna-2005-6-7-qkmpmbusz4swedkhhey7ba7l3nd75v5b
==> Installing tmalign-2016-05-25-bvlqvksi2b7qpbqv6oiuvsoslgu3ewt2
==> No binary for tmalign-2016-05-25-bvlqvksi2b7qpbqv6oiuvsoslgu3ewt2 found: installing from source
==> Warning: Skipping build of tcoffee-2017-08-17-4di7djmxvdvfe3zh6nzjauggqwad77ns since dialign-tx-1.0.2-qcm23cmrt5uprn5ip7t46ewkf54nsr4q failed
==> Fetching https://mirror.spack.io/_source-cache/archive/ce/ce7f68289f3766d525afb0a58e3acfc28ae05f538d152bd33d57f8708c60e2af.tar.gz
==> No patches needed for tmalign
==> tmalign: Executing phase: 'install'
==> tmalign: Successfully installed tmalign-2016-05-25-bvlqvksi2b7qpbqv6oiuvsoslgu3ewt2
Fetch: 1.08s. Build: 0.83s. Total: 1.90s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/tmalign-2016-05-25-bvlqvksi2b7qpbqv6oiuvsoslgu3ewt2
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/libsvm-323-qjfodzo5tnn44arisu26dukpz3r36pif
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/lzo-2.10-ilmm6evbqallg652set6a5oa26hhxcqh
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/libjpeg-9d-5ch7pzpaexz2gdf6wuzxkc2v4y3egeoi
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/clustalw-2.1-bttsne5jmbvp52atqwfggrgj43p7ohu5
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/gsl-2.7-fm4fuduogrkyoqft5vpbzv7ylz5ejlrc
==> Installing blast-plus-2.12.0-vhg47rkr4n3jc4taoboxeqgstxvpkrsi
==> No binary for blast-plus-2.12.0-vhg47rkr4n3jc4taoboxeqgstxvpkrsi found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/fd/fda3c9c9d488cad6c1880a98a236d842bcf3610e3e702af61f7a48cf0a714b88.tar.gz
==> No patches needed for blast-plus
==> blast-plus: Executing phase: 'autoreconf'
==> blast-plus: Executing phase: 'configure'
==> Error: ProcessError: Command exited with status 1:
'/vol0003/rccs-sdt/a01008/spack-stage/spack-stage-blast-plus-2.12.0-vhg47rkr4n3jc4taoboxeqgstxvpkrsi/spack-src/c++/configure' '--prefix=/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/blast-plus-2.12.0-vhg47rkr4n3jc4taoboxeqgstxvpkrsi' '--with-bin-release' '--without-debug' '--with-mt' '--without-boost' '--with-dll' '--without-static' '--without-static-exe' '--with-jpeg=/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/libjpeg-9d-5ch7pzpaexz2gdf6wuzxkc2v4y3egeoi' '--with-png=/usr' '--with-freetype=/usr' '--without-hdf5' '--with-z=/usr' '--with-bz2=/usr' '--with-lzo=/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/lzo-2.10-ilmm6evbqallg652set6a5oa26hhxcqh' '--with-gnutls=/usr' '--without-openssl' '--with-pcre=/usr' '--with-python=/vol0003/rccs-sdt/a01008/opt/python/3.9.9/fj' '--with-perl=/usr'

1 error found in build log:
56 checking whether /vol0003/rccs-sdt/a01008/spack-all-test/env-2022022
5/spack/lib/spack/env/fj/fcc has an option to discard unneeded shar
ed libraries... -Wl,--as-needed
57 checking whether /vol0003/rccs-sdt/a01008/spack-all-test/env-2022022
5/spack/lib/spack/env/fj/fcc has an option to link in whole static
archives... -Wl,--whole-archive
58 checking whether _LIBCPP_VERSION is declared... no
59 checking how to enable C++ '14 features in /vol0003/rccs-sdt/a01008/
spack-all-test/env-20220225/spack/lib/spack/env/fj/case-insensitive/
FCC ... -std=gnu++14
60 checking how to enable C '11 or at least '99 features in /vol0003/rc
cs-sdt/a01008/spack-all-test/env-20220225/spack/lib/spack/env/fj/fcc
... -std=gnu11 -fgnu89-inline
61 checking for dpkg-architecture... no
>> 62 configure: error: Unable to find static libstdc++ requested by --wit
h-bin-release.

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-blast-plus-2.12.0-vhg47rkr4n3jc4taoboxeqgstxvpkrsi/spack-build-out.txt

==> Error: tcoffee-2017-08-17-4di7djmxvdvfe3zh6nzjauggqwad77ns: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/viennarna-2.4.3-hgughivnc3as4ssj5eiwrdravntfp4bd