List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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tesseract 4.1.1

Compiler Fujitsu Compiler 4.7.0
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
src/configimpl.l.h] Error 134
191 make[2]: *** Deleting file 'generated_src/configimpl.l.h'
>> 192 Fatal Python error: Py_Initialize: Unable to get the locale encodin
g
193 ModuleNotFoundError: No module named 'encodings'
194
195 Current thread 0x0000400000045990 (most recent call first):
196 /bin/sh: line 1: 9882 Aborted /usr/bin/python /hom
e/rccs-sdt/a01008/spack-stage/spack-stage-doxygen-1.9.2-rwyuhbnzjks
ggb3xksobc73mnmnjlurf/spack-src/src/configgen.py -cpp /home/rccs-sd
t/a01008/spack-stage/spack-stage-doxygen-1.9.2-rwyuhbnzjksggb3xksob
c73mnmnjlurf/spack-src/src/config.xml > /vol0003/rccs-sdt/a01008/sp
ack-stage/spack-stage-doxygen-1.9.2-rwyuhbnzjksggb3xksobc73mnmnjlur
f/spack-build-rwyuhbn/generated_src/configoptions.cpp
>> 197 Fatal Python error: Py_Initialize: Unable to get the locale encodin
g
198 ModuleNotFoundError: No module named 'encodings'
199
200 Current thread 0x0000400000045990 (most recent call first):
201 /bin/sh: line 1: 9883 Aborted /usr/bin/python /hom
e/rccs-sdt/a01008/spack-stage/spack-stage-doxygen-1.9.2-rwyuhbnzjks
ggb3xksobc73mnmnjlurf/spack-src/src/configgen.py -maph /home/rccs-s
dt/a01008/spack-stage/spack-stage-doxygen-1.9.2-rwyuhbnzjksggb3xkso
bc73mnmnjlurf/spack-src/src/config.xml > /vol0003/rccs-sdt/a01008/s
pack-stage/spack-stage-doxygen-1.9.2-rwyuhbnzjksggb3xksobc73mnmnjlu
rf/spack-build-rwyuhbn/generated_src/configvalues.h
>> 202 make[2]: *** [src/CMakeFiles/doxycfg.dir/build.make:137: generated_
src/configoptions.cpp] Error 134
203 make[2]: *** Deleting file 'generated_src/configoptions.cpp'
>> 204 make[2]: *** [src/CMakeFiles/doxycfg.dir/build.make:123: generated_
src/configvalues.h] Error 134
205 make[2]: *** Deleting file 'generated_src/configvalues.h'
206 make[2]: Leaving directory '/vol0003/rccs-sdt/a01008/spack-stage/sp
ack-stage-doxygen-1.9.2-rwyuhbnzjksggb3xksobc73mnmnjlurf/spack-buil
d-rwyuhbn'
207 [ 11%] Built target check_git_repository
208 make[2]: Leaving directory '/vol0003/rccs-sdt/a01008/spack-stage/sp
ack-stage-doxygen-1.9.2-rwyuhbnzjksggb3xksobc73mnmnjlurf/spack-buil
d-rwyuhbn'
>> 209 make[1]: *** [CMakeFiles/Makefile2:462: src/CMakeFiles/doxycfg.dir/
all] Error 2
210 /home/rccs-sdt/a01008/spack-stage/spack-stage-doxygen-1.9.2-rwyuhbn
zjksggb3xksobc73mnmnjlurf/spack-src/src/constexp.y: warning: fix-it
s can be applied. Rerun with option '--update'. [-Wother]
211 /home/rccs-sdt/a01008/spack-stage/spack-stage-doxygen-1.9.2-rwyuhbn
zjksggb3xksobc73mnmnjlurf/spack-src/src/constexp.y: warning: fix-it
s can be applied. Rerun with option '--update'. [-Wother]
212 make[2]: Leaving directory '/vol0003/rccs-sdt/a01008/spack-stage/sp
ack-stage-doxygen-1.9.2-rwyuhbnzjksggb3xksobc73mnmnjlurf/spack-buil
d-rwyuhbn'
213 make[2]: Leaving directory '/vol0003/rccs-sdt/a01008/spack-stage/sp
ack-stage-doxygen-1.9.2-rwyuhbnzjksggb3xksobc73mnmnjlurf/spack-buil
d-rwyuhbn'
>> 214 make[1]: *** [CMakeFiles/Makefile2:305: libmscgen/CMakeFiles/mscgen
.dir/all] Error 2
>> 215 make[1]: *** [CMakeFiles/Makefile2:514: src/CMakeFiles/doxymain.dir
/all] Error 2
216 [ 11%] Linking C static library ../lib/libmd5.a
217 cd /vol0003/rccs-sdt/a01008/spack-stage/spack-stage-doxygen-1.9.2-r
wyuhbnzjksggb3xksobc73mnmnjlurf/spack-build-rwyuhbn/libmd5 && /vol0
003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/lin
ux-rhel8-a64fx/fj-4.7.0/cmake-3.21.4-vgsk3aw6j4szlnkzjz3u57u7qtoosn
kz/bin/cmake -P CMakeFiles/md5.dir/cmake_clean_target.cmake
218 cd /vol0003/rccs-sdt/a01008/spack-stage/spack-stage-doxygen-1.9.2-r
wyuhbnzjksggb3xksobc73mnmnjlurf/spack-build-rwyuhbn/libmd5 && /vol0
003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/lin
ux-rhel8-a64fx/fj-4.7.0/cmake-3.21.4-vgsk3aw6j4szlnkzjz3u57u7qtoosn
kz/bin/cmake -E cmake_link_script CMakeFiles/md5.dir/link.txt --ver
bose=1
219 /usr/bin/ar qc ../lib/libmd5.a CMakeFiles/md5.dir/md5.c.o
220 /usr/bin/ranlib ../lib/libmd5.a
221 make[2]: Leaving directory '/vol0003/rccs-sdt/a01008/spack-stage/sp
ack-stage-doxygen-1.9.2-rwyuhbnzjksggb3xksobc73mnmnjlurf/spack-buil
d-rwyuhbn'

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-doxygen-1.9.2-rwyuhbnzjksggb3xksobc73mnmnjlurf/spack-build-out.txt

[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/libgcrypt-1.9.3-rbdymdyq6pzdpcukk4muhwqgroxwrfol
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/harfbuzz-2.6.8-3afoa4mhpkcqesqxwo2dwy4t66ly6edd
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/gobject-introspection-1.56.1-bzygrjy3optgwyafpiwrcnuookdzlvtr
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/libxslt-1.1.33-fojcte4khhcgr5yjpzunmc42mgcglsgd
==> Installing pango-1.42.0-kmpglh2motg67txtknu5jsmynqoxy42v
==> No binary for pango-1.42.0-kmpglh2motg67txtknu5jsmynqoxy42v found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/99/9924d88a3dcedff753f0763814a1605307c5c9c931413b8b47ea7267d1b19446.tar.xz
==> No patches needed for pango
==> pango: Executing phase: 'autoreconf'
==> pango: Executing phase: 'configure'
==> pango: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16' 'V=1'

1 error found in build log:
864 File "<frozen importlib._bootstrap>", line 986, in _find_and_load
_unlocked
865 File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
866 File "<frozen importlib._bootstrap_external>", line 846, in exec_
module
867 File "<frozen importlib._bootstrap_external>", line 941, in get_c
ode
868 File "<frozen importlib._bootstrap_external>", line 1039, in get_
data
869 MemoryError
>> 870 make[4]: *** [/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/
spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/gobject-introspection-1.
56.1-bzygrjy3optgwyafpiwrcnuookdzlvtr/share/gobject-introspection-1
.0/Makefile.introspection:160: PangoFT2-1.0.gir] Error 1
871 make[4]: Leaving directory '/vol0003/rccs-sdt/a01008/spack-stage/sp
ack-stage-pango-1.42.0-kmpglh2motg67txtknu5jsmynqoxy42v/spack-src/p
ango'
872 make[3]: *** [Makefile:1304: all-recursive] Error 1
873 make[3]: Leaving directory '/vol0003/rccs-sdt/a01008/spack-stage/sp
ack-stage-pango-1.42.0-kmpglh2motg67txtknu5jsmynqoxy42v/spack-src/p
ango'
874 make[2]: *** [Makefile:1046: all] Error 2
875 make[2]: Leaving directory '/vol0003/rccs-sdt/a01008/spack-stage/sp
ack-stage-pango-1.42.0-kmpglh2motg67txtknu5jsmynqoxy42v/spack-src/p
ango'
876 make[1]: *** [Makefile:566: all-recursive] Error 1

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-pango-1.42.0-kmpglh2motg67txtknu5jsmynqoxy42v/spack-build-out.txt

==> Installing asciidoc-9.1.0-zy73wy2olpnmp5dzr2zuwvqxakiynwpe
==> No binary for asciidoc-9.1.0-zy73wy2olpnmp5dzr2zuwvqxakiynwpe found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/50/5056c20157349f8dc74f005b6e88ccbf1078c4e26068876f13ca3d1d7d045fe7.tar.gz
==> No patches needed for asciidoc
==> asciidoc: Executing phase: 'autoreconf'
==> Error: RuntimeError: Cannot generate configure: missing dependencies: autoconf, automake, libtool.

Please add the following lines to the package:

depends_on('autoconf', type='build', when='@9.1.0')
depends_on('automake', type='build', when='@9.1.0')
depends_on('libtool', type='build', when='@9.1.0')

Update the version (when='@9.1.0') as needed.

/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/lib/spack/spack/build_systems/autotools.py:324, in _require_build_deps:
321 msg += (" depends_on('{0}', type='build', when='@{1}')\n"
322 .format(dep, spec.version))
323
>> 324 msg += "\nUpdate the version (when='@@{0}') as needed.".format(spec.version)
325 raise RuntimeError(msg)

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-asciidoc-9.1.0-zy73wy2olpnmp5dzr2zuwvqxakiynwpe/spack-build-out.txt

==> Error: tesseract-4.1.1-6uamv7kvt2amaunhvgseg3hdtquc5f7o: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).


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