List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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vampirtrace 5.14.4

Compiler Fujitsu Compiler 4.7.0
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
kage first...
224 +++ Enhanced time synchronization
225 checking math.h usability... yes
226 checking math.h presence... yes
227 checking for math.h... yes
228 checking whether we need to link -lm to get math functions... no
229 checking f2c.h usability... no
230 checking f2c.h presence... no
231 checking for f2c.h... no
>> 232 configure: error: no f2c.h found; check path for CLAPACK package fi
rst...
233 +++ MPI trace unification library
234 checking whether PLATFORM_MPI is declared... no
235 checking whether HP_MPI is declared... no
236 checking for C++ runtime library... -lstdc++
237
238 *** Multithreading

...

257
258 *** Java
259 checking whether we can build shared libraries... yes
260 checking jvmti.h usability... no
261 checking jvmti.h presence... no
262 checking for jvmti.h... no
>> 263 configure: error: no jvmti.h found; check path for JVMTI package fi
rst...
264
265 *** Hardware performance counter
266 +++ PAPI
267 checking papi.h usability... yes
268 checking papi.h presence... yes
269 checking for papi.h... yes

...

295 +++ Symbol demangling
296 configure: disabled by default
297 +++ CUDA Toolkit
298 checking cuda.h usability... no
299 checking cuda.h presence... no
300 checking for cuda.h... no
>> 301 configure: error: no cuda.h found; check path for CUDA Toolkit firs
t...
302 checking cuda_runtime_api.h usability... no
303 checking cuda_runtime_api.h presence... no
304 checking for cuda_runtime_api.h... no
>> 305 configure: error: no cuda_runtime_api.h found; check path for CUDA
Toolkit first...
306 +++ CUDA Tools
307 checking cupti.h usability... no
308 checking cupti.h presence... no
309 checking for cupti.h... no
>> 310 configure: error: no cupti.h found; check path for CUPTI package fi
rst...
311
312 *** Library tracing
313 checking for dlfcn.h... (cached) yes
314 checking whether linking with -ldl works... yes
315 checking whether RTLD_DEFAULT is declared... (cached) yes
316 checking whether RTLD_NEXT is declared... (cached) yes
317 checking for shared LIBC's pathname... /lib64/libc.so.6
318 checking whether __errno_location is declared... yes
319 +++ Library wrapper generator
320 checking ctool/ctool.h usability... no
321 checking ctool/ctool.h presence... no
322 checking for ctool/ctool.h... no
>> 323 configure: error: no ctool/ctool.h found; check path for CTool pack
age first...
324 +++ LIBC-EXEC
325 checking for __WAIT_STATUS... no
326 checking whether environ is declared... yes
327 checking for execvpe... yes
328 checking for fexecve... yes
329 checking for waitid... yes

...

362 checking zlib.h presence... yes
363 checking for zlib.h... yes
364 checking whether linking with -lz works... yes
365 checking bmi.h usability... no
366 checking bmi.h presence... no
367 checking for bmi.h... no
>> 368 configure: error: no bmi.h found; check path for BMI package first.
..
369 checking otf.h usability... yes
370 checking otf.h presence... yes
371 checking for otf.h... yes
372 checking whether linking with -lopen-trace-format -L/usr/lib -lz
works... yes
373
374 *** Compiler wrappers

...

770 In file included from /usr/include/bits/libc-header-start.h:33:
771 In file included from /opt/FJSVxtclanga/tcsds-latest/include/featur
es.h:53:
772 /usr/include/features.h:184:3: warning: "_BSD_SOURCE and _SVID_SOUR
CE are deprecated, use _DEFAULT_SOURCE" [-W#warnings]
773 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAUL
T_SOURCE"
774 ^
775 In file included from vt_mpiwrap.c:7101:
>> 776 ./vt_mpiwrap.gen.c:2287:12: error: conflicting types for 'MPI_Type_
hindexed'
777 VT_MPI_INT MPI_Type_hindexed(VT_MPI_INT count, CONST VT_MPI_INT* ar
ray_of_blocklengths, CONST MPI_Aint* array_of_displacements_CLASS_A
RRAY_IN_count, MPI_Datatype oldtype, MPI_Datatype* newtype_CLASS_SI
NGLE_OUT)
778 ^
779 /opt/FJSVxtclanga/.common/MECA026/include/mpi/fujitsu/mpi.h:2788:20
: note: previous declaration is here
780 OMPI_DECLSPEC int MPI_Type_hindexed(int count, int array_of_blockl
engths[],
781 ^
782 In file included from vt_mpiwrap.c:7101:

...

805 result = PMPI_Type_hindexed(count, array_of_blocklengths, array
_of_displacements_CLASS_ARRAY_IN_count, oldtype, newtype_CLASS_SING
LE_OUT);
806 ^~~~~
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
807 /opt/FJSVxtclanga/.common/MECA026/include/mpi/fujitsu/mpi.h:2793:48
: note: passing argument to parameter 'array_of_displacements' here
808 MPI_Aint array_of_displacemen
ts[],
809 ^
810 In file included from vt_mpiwrap.c:7101:
>> 811 ./vt_mpiwrap.gen.c:2497:12: error: conflicting types for 'MPI_Type_
struct'
812 VT_MPI_INT MPI_Type_struct(VT_MPI_INT count, CONST VT_MPI_INT* arra
y_of_blocklengths, CONST MPI_Aint* array_of_displacements_CLASS_ARR
AY_IN_count, CONST MPI_Datatype* array_of_types_CLASS_ARRAY_IN_coun
t, MPI_Datatype* newtype_CLASS_SINGLE_OUT)
813 ^
814 /opt/FJSVxtclanga/.common/MECA026/include/mpi/fujitsu/mpi.h:2806:20
: note: previous declaration is here
815 OMPI_DECLSPEC int MPI_Type_struct(int count, int array_of_blocklen
gths[],
816 ^
817 In file included from vt_mpiwrap.c:7101:

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-vampirtrace-5.14.4-yrpqjxvmcjlg5udskw4ftkqkllhb4jzz/spack-build-out.txt


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