List of Open Source Software which can be built on Fugaku
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Spack will be used to manage open source software packages on Fugaku.
Fugaku users can easily use pre-installed packages and built packages based on Spack recipes.
The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes.
Note that the results in this list do not guarantee that each package will work properly.
On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
|
yambo 4.2.2
| Compiler | Fujitsu Compiler 4.7.0 |
|---|---|
| Result | Timed out |
Failed Reason
[+] /opt/FJSVxtclanga/tcsds-latest (external fujitsu-mpi-head-vd7w2nwkpb4xunj3jfc247mbi6kn4q5h)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.8.0/gnuconfig-2021-08-14-2k46n4aahhbmwyi4gq6kvlzyr7xciws2
[+] /opt/FJSVxtclanga/tcsds-latest (external fujitsu-ssl2-head-c5gkrrhluymkuneaac64ulzvmhgfrsaj)
[+] /usr (external ncurses-6.1-jocm2bihm6qlznsqqnjqtt5cxvi2qn5k)
[+] /usr (external numactl-2.0.12-odoh7aqbj7i5a5g3vz22qc5txdflxovj)
[+] /usr (external pkgconf-1.4.2-6nsf4jovctb2jtx5mxfgye433o6zbgaf)
[+] /usr (external zlib-1.2.11-3aij46zqvirwfjocjtkpwtybf5canm6g)
[+] /usr (external perl-5.26.3-6yevd433ikbm4ozwno3q4tbkjjac4siv)
[+] /usr (external m4-1.4.18-yuhpaazrj2b3tb4yz5azacfp5sck3pbh)
==> Installing fftw-3.3.10-x733nuodkci4emv34jma3uafjd3s4ywb
==> No binary for fftw-3.3.10-x733nuodkci4emv34jma3uafjd3s4ywb found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/56/56c932549852cddcfafdab3820b0200c7742675be92179e59e6215b340e26467.tar.gz
==> Ran patch() for fftw
==> fftw: Executing phase: 'autoreconf'
==> fftw: Executing phase: 'configure'
==> Error: ProcessError: Command exited with status 1:
'../configure' '--prefix=/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.8.0/fftw-3.3.10-x733nuodkci4emv34jma3uafjd3s4ywb' '--enable-shared' '--enable-threads' '--enable-mpi' '--disable-sse2' '--disable-avx' '--disable-avx2' '--disable-avx512' '--disable-avx-128-fma' '--disable-kcvi' '--disable-vsx' '--disable-fma'
1 error found in build log:
86 checking for ranlib... (cached) ranlib
87 checking for ocamlbuild... no
88 checking for mpicc... /opt/FJSVxtclanga/tcsds-latest/bin/mpifcc
89 checking for MPI_Init... no
90 checking for MPI_Init in -lmpi... no
91 checking for MPI_Init in -lmpich... no
>> 92 configure: error: could not find mpi library for --enable-mpi
See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-fftw-3.3.10-x733nuodkci4emv34jma3uafjd3s4ywb/spack-build-out.txt
==> Installing libxc-5.1.5-jylgf4sasvyhlomeb2rqkbyofa5ctbcv
==> No binary for libxc-5.1.5-jylgf4sasvyhlomeb2rqkbyofa5ctbcv found: installing from source
==> Warning: Skipping build of yambo-4.2.2-p2peaxqxjoemq67jelkktm2w4xfs6zfq since fftw-3.3.10-x733nuodkci4emv34jma3uafjd3s4ywb failed
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/02/02e4615a22dc3ec87a23efbd3d9be5bfad2445337140bad1720699571c45c3f9.tar.gz
==> No patches needed for libxc
==> libxc: Executing phase: 'autoreconf'
==> libxc: Executing phase: 'configure'
==> libxc: Executing phase: 'build'
==> libxc: Executing phase: 'install'
==> libxc: Successfully installed libxc-5.1.5-jylgf4sasvyhlomeb2rqkbyofa5ctbcv
Fetch: 0.56s. Build: 29m 39.50s. Total: 29m 40.07s.
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.8.0/libxc-5.1.5-jylgf4sasvyhlomeb2rqkbyofa5ctbcv
==> Error: Failed to install libxc due to LockTimeoutError: Timed out waiting for a write lock.
==> Error: Timed out waiting for a read lock.
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