List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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zabbix 5.0.3

Compiler Fujitsu Compiler 4.7.0
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
ls/clang-linux.jam:63: in clang-linux.init
29 *** argument error
30 * rule clang.init-cxxstd-flags ( toolset : condition * : version )
31 * called with: ( clang-linux : <toolset>clang-linux : )
32 * missing argument version
33 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-boost-1
.70.0-7esvmdgukz34gszo3tsu4ey3go336fmq/spack-src/tools/build/src/too
ls/clang.jam:54:see definition of rule 'clang.init-cxxstd-flags' bei
ng called
>> 34 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-boost-1
.70.0-7esvmdgukz34gszo3tsu4ey3go336fmq/spack-src/tools/build/src/bui
ld/toolset.jam:44: in toolset.using
>> 35 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-boost-1
.70.0-7esvmdgukz34gszo3tsu4ey3go336fmq/spack-src/tools/build/src/too
ls/clang.jam:33: in clang.init
>> 36 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-boost-1
.70.0-7esvmdgukz34gszo3tsu4ey3go336fmq/spack-src/tools/build/src/bui
ld/toolset.jam:44: in toolset.using
>> 37 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-boost-1
.70.0-7esvmdgukz34gszo3tsu4ey3go336fmq/spack-src/tools/build/src/bui
ld/project.jam:1104: in using
>> 38 /data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-boost-1.70.0-7e
svmdgukz34gszo3tsu4ey3go336fmq/spack-src/user-config.jam:1: in modul
es.load
>> 39 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-boost-1
.70.0-7esvmdgukz34gszo3tsu4ey3go336fmq/spack-src/tools/build/src/bui
ld-system.jam:255: in load-config
>> 40 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-boost-1
.70.0-7esvmdgukz34gszo3tsu4ey3go336fmq/spack-src/tools/build/src/bui
ld-system.jam:449: in load-configuration-files
>> 41 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-boost-1
.70.0-7esvmdgukz34gszo3tsu4ey3go336fmq/spack-src/tools/build/src/bui
ld-system.jam:607: in load
>> 42 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-boost-1
.70.0-7esvmdgukz34gszo3tsu4ey3go336fmq/spack-src/tools/build/src/ker
nel/modules.jam:295: in import
>> 43 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-boost-1
.70.0-7esvmdgukz34gszo3tsu4ey3go336fmq/spack-src/tools/build/src/ker
nel/bootstrap.jam:139: in boost-build
>> 44 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-boost-1
.70.0-7esvmdgukz34gszo3tsu4ey3go336fmq/spack-src/boost-build.jam:17:
in module scope

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-boost-1.70.0-7esvmdgukz34gszo3tsu4ey3go336fmq/spack-build-out.txt

==> Installing libunistring-0.9.10-tbtwrqhknmbma6qcad3dp4zvgc3vejoa
==> No binary for libunistring-0.9.10-tbtwrqhknmbma6qcad3dp4zvgc3vejoa found: installing from source
==> Warning: diffutils-3.8-p3ng3suclb5vyc3qxoe3ilpldavyb7i2 failed to install
==> Warning: Skipping build of bison-3.8.2-rq6dp3abgcp3nhrqz3kc74mrpkzyaxno since diffutils-3.8-p3ng3suclb5vyc3qxoe3ilpldavyb7i2 failed
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/eb/eb8fb2c3e4b6e2d336608377050892b54c3c983b646c561836550863003c05d7.tar.xz
==> Ran patch() for libunistring
==> libunistring: Executing phase: 'autoreconf'
==> libunistring: Executing phase: 'configure'
==> libunistring: Executing phase: 'build'
==> libunistring: Executing phase: 'install'
==> libunistring: Successfully installed libunistring-0.9.10-tbtwrqhknmbma6qcad3dp4zvgc3vejoa
Fetch: 0.06s. Build: 20m 35.56s. Total: 20m 35.63s.
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.8.0/libunistring-0.9.10-tbtwrqhknmbma6qcad3dp4zvgc3vejoa
==> Installing libbsd-0.11.3-in6djsfk6vkyfk6igyrrf2q3to7y5rsn
==> No binary for libbsd-0.11.3-in6djsfk6vkyfk6igyrrf2q3to7y5rsn found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/ff/ff95cf8184151dacae4247832f8d4ea8800fa127dbd15033ecfe839f285b42a1.tar.xz
==> Ran patch() for libbsd
==> libbsd: Executing phase: 'autoreconf'
==> libbsd: Executing phase: 'configure'
==> libbsd: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16' 'V=1'

2 errors found in build log:
316 libtool: compile: /vol0003/rccs-sdt/data/a01008/spack-all-test/env
-20220225/spack/lib/spack/env/fj/fcc -DHAVE_CONFIG_H -I.. -isystem
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-libbsd-0.11.3-
in6djsfk6vkyfk6igyrrf2q3to7y5rsn/spack-src/include/bsd/ -include ..
/config.h -DLIBBSD_OVERLAY -DLIBBSD_DISABLE_DEPRECATED -D__REENTRAN
T -g -O2 -Wall -Wextra -Wno-unused-variable -Wno-unused-parameter -
MT funopen.lo -MD -MP -MF .deps/funopen.Tpo -c funopen.c -fPIC -DP
IC -o .libs/funopen.o
317 libtool: compile: /vol0003/rccs-sdt/data/a01008/spack-all-test/env
-20220225/spack/lib/spack/env/fj/fcc -DHAVE_CONFIG_H -I.. -isystem
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-libbsd-0.11.3-
in6djsfk6vkyfk6igyrrf2q3to7y5rsn/spack-src/include/bsd/ -include ..
/config.h -DLIBBSD_OVERLAY -DLIBBSD_DISABLE_DEPRECATED -D__REENTRAN
T -g -O2 -Wall -Wextra -Wno-unused-variable -Wno-unused-parameter -
MT fgetln.lo -MD -MP -MF .deps/fgetln.Tpo -c fgetln.c -o fgetln.o >
/dev/null 2>&1
318 libtool: compile: /vol0003/rccs-sdt/data/a01008/spack-all-test/env
-20220225/spack/lib/spack/env/fj/fcc -DHAVE_CONFIG_H -I.. -isystem
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-libbsd-0.11.3-
in6djsfk6vkyfk6igyrrf2q3to7y5rsn/spack-src/include/bsd/ -include ..
/config.h -DLIBBSD_OVERLAY -DLIBBSD_DISABLE_DEPRECATED -D__REENTRAN
T -g -O2 -Wall -Wextra -Wno-unused-variable -Wno-unused-parameter -
MT expand_number.lo -MD -MP -MF .deps/expand_number.Tpo -c expand_n
umber.c -o expand_number.o >/dev/null 2>&1
319 libtool: compile: /vol0003/rccs-sdt/data/a01008/spack-all-test/env
-20220225/spack/lib/spack/env/fj/fcc -DHAVE_CONFIG_H -I.. -isystem
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-libbsd-0.11.3-
in6djsfk6vkyfk6igyrrf2q3to7y5rsn/spack-src/include/bsd/ -include ..
/config.h -DLIBBSD_OVERLAY -DLIBBSD_DISABLE_DEPRECATED -D__REENTRAN
T -g -O2 -Wall -Wextra -Wno-unused-variable -Wno-unused-parameter -
MT fmtcheck.lo -MD -MP -MF .deps/fmtcheck.Tpo -c fmtcheck.c -o fmtc
heck.o >/dev/null 2>&1
320 libtool: compile: /vol0003/rccs-sdt/data/a01008/spack-all-test/env
-20220225/spack/lib/spack/env/fj/fcc -DHAVE_CONFIG_H -I.. -isystem
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-libbsd-0.11.3-
in6djsfk6vkyfk6igyrrf2q3to7y5rsn/spack-src/include/bsd/ -include ..
/config.h -DLIBBSD_OVERLAY -DLIBBSD_DISABLE_DEPRECATED -D__REENTRAN
T -g -O2 -Wall -Wextra -Wno-unused-variable -Wno-unused-parameter -
MT fpurge.lo -MD -MP -MF .deps/fpurge.Tpo -c fpurge.c -o fpurge.o >
/dev/null 2>&1
321 libtool: compile: /vol0003/rccs-sdt/data/a01008/spack-all-test/env
-20220225/spack/lib/spack/env/fj/fcc -DHAVE_CONFIG_H -I.. -isystem
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-libbsd-0.11.3-
in6djsfk6vkyfk6igyrrf2q3to7y5rsn/spack-src/include/bsd/ -include ..
/config.h -DLIBBSD_OVERLAY -DLIBBSD_DISABLE_DEPRECATED -D__REENTRAN
T -g -O2 -Wall -Wextra -Wno-unused-variable -Wno-unused-parameter -
MT arc4random_uniform.lo -MD -MP -MF .deps/arc4random_uniform.Tpo -
c arc4random_uniform.c -o arc4random_uniform.o >/dev/null 2>&1
>> 322 "err.c", line 42: error: argument of type "va_list" is incompatible
with parameter of type "void *"
323 vfprintf(stderr, format, ap);
324 ^
325
>> 326 "err.c", line 63: error: argument of type "va_list" is incompatible
with parameter of type "void *"
327 vfprintf(stderr, format, ap);
328 ^
329
330 2 errors detected in the compilation of "err.c".
331 make[2]: *** [Makefile:650: err.lo] Error 1
332 make[2]: *** Waiting for unfinished jobs....

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-libbsd-0.11.3-in6djsfk6vkyfk6igyrrf2q3to7y5rsn/spack-build-out.txt

==> Installing libidn2-2.3.0-ezsiewgobeksp2xww7t7gw7tkz6g7ta3
==> No binary for libidn2-2.3.0-ezsiewgobeksp2xww7t7gw7tkz6g7ta3 found: installing from source
==> Warning: Skipping build of expat-2.4.1-iglpbbhegjweqzo6n6xqm6xpz2ihjdnp since libbsd-0.11.3-in6djsfk6vkyfk6igyrrf2q3to7y5rsn failed
==> Warning: Skipping build of git-2.31.1-fqndb4t43g4z5ko6xwfv2u4ztj5doeeh since expat-2.4.1-iglpbbhegjweqzo6n6xqm6xpz2ihjdnp failed
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/e1/e1cb1db3d2e249a6a3eb6f0946777c2e892d5c5dc7bd91c74394fc3a01cab8b5.tar.gz
==> No patches needed for libidn2
==> libidn2: Executing phase: 'autoreconf'
==> libidn2: Executing phase: 'configure'
==> libidn2: Executing phase: 'build'
==> libidn2: Executing phase: 'install'
==> libidn2: Successfully installed libidn2-2.3.0-ezsiewgobeksp2xww7t7gw7tkz6g7ta3
Fetch: 0.08s. Build: 5m 43.34s. Total: 5m 43.42s.
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.8.0/libidn2-2.3.0-ezsiewgobeksp2xww7t7gw7tkz6g7ta3
==> Error: zabbix-5.0.3-puyfxxkwkqirlt3dknlt3k5fhzbu54m4: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).


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