List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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accfft develop

Compiler Fujitsu Compiler Fujitsu C/C++ Compiler 4.10.0 tcsds-1.2.38
Result Dependency Error

Failed Reason

Failed to install dependency package :
==> Warning: config:terminal_title has been replaced by install_status and is ignored
==> Warning: Failed to initialize repository: '$spack/var/spack/repos/local'.
No repo.yaml found in '$spack/var/spack/repos/local'
To remove the bad repository, run this command:
spack repo rm $spack/var/spack/repos/local
[+] /usr (external curl-7.61.1-qsvgylcys5hkzdnl2pdh4blrprxlsp5m)
[+] /usr (external ncurses-6.1-a6lc7oq2dlgphtibbpp6x72mqgmscros)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3
[+] /usr (external gmake-4.2.1-eszqmok6vi6wxcmklx6bqloeidbh25kb)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/gnuconfig-2022-09-17-w33oejhx46ex2iql4orzjqdmt2kdqdb2
[+] /opt/FJSVxtclanga/tcsds-mpi-latest (external fujitsu-mpi-head-3njd5uwuazr4j2no6fqh4cpjmezknh3z)
[+] /usr (external m4-1.4.18-craoyd3hmfdcanz7zxglna5yxcvdtoem)
[+] /usr (external perl-5.26.3-rkgbbov2pluaat3kknhtag5ui3vltkqk)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/cmake-3.27.7-ussgjuqkqbxi5dcv7kbp6bugdcjc5ph6
==> Installing fftw-3.3.10-7fscd6vrdbrju37oabj7qsr5l62jbdqc [10/12]
==> No binary for fftw-3.3.10-7fscd6vrdbrju37oabj7qsr5l62jbdqc found: installing from source
==> Fetching
==> Ran patch() for fftw
==> fftw: Executing phase: 'autoreconf'
==> fftw: Executing phase: 'configure'
==> fftw: Executing phase: 'build'
==> fftw: Executing phase: 'install'
==> fftw: Successfully installed fftw-3.3.10-7fscd6vrdbrju37oabj7qsr5l62jbdqc
Stage: 1m 27.12s. Autoreconf: 1.25s. Configure: 39m 48.16s. Build: 38m 39.97s. Install: 5m 39.83s. Post-install: 1.63s. Total: 1h 25m 39.23s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/fftw-3.3.10-7fscd6vrdbrju37oabj7qsr5l62jbdqc
==> Installing parallel-netcdf-1.12.3-jwyav35aazcub2vfdct6o6wojojci5iw [11/12]
==> No binary for parallel-netcdf-1.12.3-jwyav35aazcub2vfdct6o6wojojci5iw found: installing from source
==> Fetching
==> No patches needed for parallel-netcdf
==> parallel-netcdf: Executing phase: 'autoreconf'
==> parallel-netcdf: Executing phase: 'configure'
==> parallel-netcdf: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16' 'V=1'

6 errors found in build log:
806 checking for a BSD-compatible install... /usr/bin/install -c
807 checking whether build environment is sane... yes
808 checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
809 checking for gawk... gawk
810 checking whether make sets $(MAKE)... yes
811 checking whether make supports nested variables... yes
>> 812 configure: error: source directory already configured; run "make di
stclean" there first
>> 813 make[4]: *** [Makefile:512: config.status] Error 1
814 make[4]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/sp
>> 815 make[3]: *** [Makefile:459: /data/rccs-sdt/a01008/tmpdir/spack-stag
iw/spack-src/configure] Error 2
816 make[3]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/sp
>> 817 make[2]: *** [Makefile:477: all-recursive] Error 1
818 make[2]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/sp
>> 819 make[1]: *** [Makefile:479: all-recursive] Error 1
820 make[1]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/sp
>> 821 make: *** [Makefile:536: all-recursive] Error 1

See build log for details:

==> Warning: Skipping build of accfft-develop-ua3vswc2rovcqnaaq3lcwq5ymue5f7bx since parallel-netcdf-1.12.3-jwyav35aazcub2vfdct6o6wojojci5iw failed
==> Error: accfft-develop-ua3vswc2rovcqnaaq3lcwq5ymue5f7bx: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).

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