Failed Reason

Failed to install dependency package :
------------------------------------------------
==> Warning: config:terminal_title has been replaced by install_status and is ignored
==> Warning: Failed to initialize repository: '$spack/var/spack/repos/local'.
No repo.yaml found in '$spack/var/spack/repos/local'
To remove the bad repository, run this command:
spack repo rm $spack/var/spack/repos/local
[+] /usr (external gettext-0.19.8.1-6jl23wn6jpwquhvqibpwhvia7vxsgrq3)
[+] /usr (external m4-1.4.18-craoyd3hmfdcanz7zxglna5yxcvdtoem)
[+] /usr (external bzip2-1.0.6-r4iabrte3nd5eemcd5v5coc3kvsnoyzu)
[+] /opt/FJSVxtclanga/tcsds-mpi-latest (external fujitsu-mpi-head-3njd5uwuazr4j2no6fqh4cpjmezknh3z)
[+] /usr (external gmake-4.2.1-eszqmok6vi6wxcmklx6bqloeidbh25kb)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/gnuconfig-2022-09-17-w33oejhx46ex2iql4orzjqdmt2kdqdb2
[+] /usr (external lz4-1.8.3-ldbpdr7ujm6p5vdasnwd2ujsioqi34gf)
[+] /usr (external curl-7.61.1-qsvgylcys5hkzdnl2pdh4blrprxlsp5m)
[+] /usr (external ncurses-6.1-a6lc7oq2dlgphtibbpp6x72mqgmscros)
[+] /usr (external pkgconf-1.4.2-mmjuloqcob6vnd6bylwgum67waaa3kht)
[+] /usr (external perl-5.26.3-rkgbbov2pluaat3kknhtag5ui3vltkqk)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/snappy-1.1.10-j7x2zk63lmbm36rc724j3ik66antzv5k
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libaec-1.0.6-5mds5a4x6u7m2ysxqxxgm2l6tpax77ds
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zstd-1.5.5-o7dcxyae4kjgruht44yuloa27ddisxfe
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/flex-2.6.3-udlfzibabfli2hc4lyhfxk7p5xd3pv4f
==> Installing tcsh-6.24.00-4dwwf6tqgqmwu4ofir6e7dybjub5f6cu [17/25]
==> No binary for tcsh-6.24.00-4dwwf6tqgqmwu4ofir6e7dybjub5f6cu found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/60/60be2c504bd8f1fa6e424b1956495d7e7ced52a2ac94db5fd27f4b6bfc8f74f0.tar.gz
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/3a/3a4e60fe56a450632140c48acbf14d22850c1d72835bf441e3f8514d6c617a9f
==> Applied patch https://src.fedoraproject.org/rpms/tcsh/raw/8a6066c901fb4fc75013dd488ba958387f00c74d/f/tcsh-6.20.00-manpage-memoryuse.patch
==> tcsh: Executing phase: 'autoreconf'
==> tcsh: Executing phase: 'configure'
==> tcsh: Executing phase: 'build'
==> tcsh: Executing phase: 'install'
==> tcsh: Successfully installed tcsh-6.24.00-4dwwf6tqgqmwu4ofir6e7dybjub5f6cu
Stage: 26.30s. Autoreconf: 0.97s. Configure: 1m 10.20s. Build: 1m 2.96s. Install: 1.49s. Post-install: 1.39s. Total: 2m 44.16s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/tcsh-6.24.00-4dwwf6tqgqmwu4ofir6e7dybjub5f6cu
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/bison-3.8.2-kviw7pt3aorzqonkoy2vxqd5nzod5xdv
==> Installing parallel-netcdf-1.12.3-jwyav35aazcub2vfdct6o6wojojci5iw [19/25]
==> No binary for parallel-netcdf-1.12.3-jwyav35aazcub2vfdct6o6wojojci5iw found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/cache/_source-cache/archive/43/439e359d09bb93d0e58a6e3f928f39c2eae965b6c97f64e67cd42220d6034f77.tar.gz
==> No patches needed for parallel-netcdf
==> parallel-netcdf: Executing phase: 'autoreconf'
==> parallel-netcdf: Executing phase: 'configure'
==> parallel-netcdf: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16' 'V=1'

6 errors found in build log:
806 checking for a BSD-compatible install... /usr/bin/install -c
807 checking whether build environment is sane... yes
808 checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
809 checking for gawk... gawk
810 checking whether make sets $(MAKE)... yes
811 checking whether make supports nested variables... yes
>> 812 configure: error: source directory already configured; run "make di
stclean" there first
>> 813 make[4]: *** [Makefile:512: config.status] Error 1
814 make[4]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/sp
ack-stage/spack-stage-parallel-netcdf-1.12.3-jwyav35aazcub2vfdct6o6
wojojci5iw/spack-src'
>> 815 make[3]: *** [Makefile:459: /data/rccs-sdt/a01008/tmpdir/spack-stag
e/spack-stage-parallel-netcdf-1.12.3-jwyav35aazcub2vfdct6o6wojojci5
iw/spack-src/configure] Error 2
816 make[3]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/sp
ack-stage/spack-stage-parallel-netcdf-1.12.3-jwyav35aazcub2vfdct6o6
wojojci5iw/spack-src/src/binding'
>> 817 make[2]: *** [Makefile:477: all-recursive] Error 1
818 make[2]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/sp
ack-stage/spack-stage-parallel-netcdf-1.12.3-jwyav35aazcub2vfdct6o6
wojojci5iw/spack-src/src/binding'
>> 819 make[1]: *** [Makefile:479: all-recursive] Error 1
820 make[1]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/sp
ack-stage/spack-stage-parallel-netcdf-1.12.3-jwyav35aazcub2vfdct6o6
wojojci5iw/spack-src/src'
>> 821 make: *** [Makefile:536: all-recursive] Error 1

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-parallel-netcdf-1.12.3-jwyav35aazcub2vfdct6o6wojojci5iw/spack-build-out.txt

==> Warning: Skipping build of amber-20-x42qfjermz7zydoqif6eh3y43psmrch5 since parallel-netcdf-1.12.3-jwyav35aazcub2vfdct6o6wojojci5iw failed
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/c-blosc-1.21.5-66ynsnfbl2evrc6id523jcamtzvu2ugx
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/cmake-3.27.7-ussgjuqkqbxi5dcv7kbp6bugdcjc5ph6
==> Installing hdf5-1.14.3-qxnacxgse3udxh7b6wscu6iz3vsyvu6a [22/25]
==> No binary for hdf5-1.14.3-qxnacxgse3udxh7b6wscu6iz3vsyvu6a found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/cache/_source-cache/archive/09/09cdb287aa7a89148c1638dd20891fdbae08102cf433ef128fd345338aa237c7.tar.gz
==> Ran patch() for hdf5
==> hdf5: Executing phase: 'cmake'
==> hdf5: Executing phase: 'build'
==> hdf5: Executing phase: 'install'
==> hdf5: Successfully installed hdf5-1.14.3-qxnacxgse3udxh7b6wscu6iz3vsyvu6a
Stage: 1m 36.42s. Cmake: 17m 30.73s. Build: 19m 20.02s. Install: 29.29s. Post-install: 4.88s. Total: 39m 3.46s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/hdf5-1.14.3-qxnacxgse3udxh7b6wscu6iz3vsyvu6a
==> Installing netcdf-c-4.9.2-gnv35ekwuowxz4iyaik777xaxvno4pvm [23/25]
==> No binary for netcdf-c-4.9.2-gnv35ekwuowxz4iyaik777xaxvno4pvm found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/bc/bc104d101278c68b303359b3dc4192f81592ae8640f1aee486921138f7f88cb7.tar.gz
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/01/0161eb870fdfaf61be9d70132c9447a537320342366362e76b8460c823bf95ca
==> Applied patch https://github.com/Unidata/netcdf-c/commit/f8904d5a1d89420dde0f9d2c0e051ba08d08e086.patch?full_index=1
==> netcdf-c: Executing phase: 'autoreconf'
==> netcdf-c: Executing phase: 'configure'
==> netcdf-c: Executing phase: 'build'
==> netcdf-c: Executing phase: 'install'
==> netcdf-c: Successfully installed netcdf-c-4.9.2-gnv35ekwuowxz4iyaik777xaxvno4pvm
Stage: 1m 2.88s. Autoreconf: 0.01s. Configure: 5m 38.67s. Build: 6m 13.80s. Install: 13.88s. Post-install: 3.64s. Total: 13m 17.25s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/netcdf-c-4.9.2-gnv35ekwuowxz4iyaik777xaxvno4pvm
==> Installing netcdf-fortran-4.6.1-bkffw4y4sbe7kps7vd2knwcjr7cjjlrh [24/25]
==> No binary for netcdf-fortran-4.6.1-bkffw4y4sbe7kps7vd2knwcjr7cjjlrh found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/b5/b50b0c72b8b16b140201a020936aa8aeda5c79cf265c55160986cd637807a37a.tar.gz
==> No patches needed for netcdf-fortran
==> netcdf-fortran: Executing phase: 'autoreconf'
==> netcdf-fortran: Executing phase: 'configure'
==> netcdf-fortran: Executing phase: 'build'
==> netcdf-fortran: Executing phase: 'install'
==> netcdf-fortran: Successfully installed netcdf-fortran-4.6.1-bkffw4y4sbe7kps7vd2knwcjr7cjjlrh
Stage: 13.28s. Autoreconf: 1.00s. Configure: 2m 16.97s. Build: 46.47s. Install: 3.50s. Post-install: 1.76s. Total: 3m 25.98s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/netcdf-fortran-4.6.1-bkffw4y4sbe7kps7vd2knwcjr7cjjlrh
==> Error: amber-20-x42qfjermz7zydoqif6eh3y43psmrch5: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).