List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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arbor 0.9.0

Compiler Fujitsu Compiler Fujitsu C/C++ Compiler 4.10.0 tcsds-1.2.38
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
==> Warning: config:terminal_title has been replaced by install_status and is ignored
==> Warning: Failed to initialize repository: '$spack/var/spack/repos/local'.
No repo.yaml found in '$spack/var/spack/repos/local'
To remove the bad repository, run this command:
spack repo rm $spack/var/spack/repos/local
[+] /usr (external curl-7.61.1-qsvgylcys5hkzdnl2pdh4blrprxlsp5m)
[+] /usr (external ncurses-6.1-a6lc7oq2dlgphtibbpp6x72mqgmscros)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3
[+] /usr (external gmake-4.2.1-eszqmok6vi6wxcmklx6bqloeidbh25kb)
[+] /opt/FJSVxtclanga/tcsds-ssl2-latest (external fujitsu-ssl2-head-7eif42hdxt2tixz7cufiyhj62kz3jntb)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/ninja-1.11.1-hkoahomauz36ql3b7gyr3bbjctk3swkj
[+] /usr (external pkgconf-1.4.2-mmjuloqcob6vnd6bylwgum67waaa3kht)
[+] /vol0004/apps/oss/spack-v0.19/opt/spack/linux-rhel8-a64fx/fj-4.8.1/python-3.10.8-7q66snjvhvy7im57hncbgpirmddrb5sk (external python-3.10.8-zcbuy6dnhwhmsrco46b6ayaywy4nrfcy)
==> Installing random123-1.14.0-ycah2yetda7kltbsmbob2stbzcctwv77 [9/24]
==> No binary for random123-1.14.0-ycah2yetda7kltbsmbob2stbzcctwv77 found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/ef/effafd8656b18030b2a5b995cd3650c51a7c45052e6e1c21e48b9fa7a59d926e.tar.gz
==> No patches needed for random123
==> random123: Executing phase: 'install'
==> random123: Successfully installed random123-1.14.0-ycah2yetda7kltbsmbob2stbzcctwv77
Stage: 7.96s. Install: 1.05s. Post-install: 0.89s. Total: 10.45s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/random123-1.14.0-ycah2yetda7kltbsmbob2stbzcctwv77
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/cmake-3.27.7-ussgjuqkqbxi5dcv7kbp6bugdcjc5ph6
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-setuptools-68.0.0-umhokgnekqyzlgjhl6pifea67uvzwnge
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-packaging-23.1-yxzztmamwtgtkjqep4mb57ht6ztozn7a
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-wheel-0.41.2-uecnqi7ns7hm2wehm3fwrq4fyygklprs
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-pip-23.1.2-e5mqkkojghz4zpl6zboxzql3mko55ccd
==> Installing fmt-10.1.1-ffkysoxpbmkiqxf6wc7q5jodoskekruo [15/24]
==> No binary for fmt-10.1.1-ffkysoxpbmkiqxf6wc7q5jodoskekruo found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/b8/b84e58a310c9b50196cda48d5678d5fa0849bca19e5fdba6b684f0ee93ed9d1b.zip
==> No patches needed for fmt
==> fmt: Executing phase: 'cmake'
==> fmt: Executing phase: 'build'
==> fmt: Executing phase: 'install'
==> fmt: Successfully installed fmt-10.1.1-ffkysoxpbmkiqxf6wc7q5jodoskekruo
Stage: 8.22s. Cmake: 8.96s. Build: 20.60s. Install: 2.63s. Post-install: 1.11s. Total: 43.40s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/fmt-10.1.1-ffkysoxpbmkiqxf6wc7q5jodoskekruo
==> Installing googletest-1.12.1-ndkdlrebk2jogmzo4h5nbmargevuxixx [16/24]
==> No binary for googletest-1.12.1-ndkdlrebk2jogmzo4h5nbmargevuxixx found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/81/81964fe578e9bd7c94dfdb09c8e4d6e6759e19967e397dbea48d1c10e45d0df2.tar.gz
==> No patches needed for googletest
==> googletest: Executing phase: 'cmake'
==> googletest: Executing phase: 'build'
==> googletest: Executing phase: 'install'
==> googletest: Successfully installed googletest-1.12.1-ndkdlrebk2jogmzo4h5nbmargevuxixx
Stage: 7.21s. Cmake: 14.46s. Build: 1m 7.74s. Install: 4.62s. Post-install: 1.77s. Total: 1m 37.68s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/googletest-1.12.1-ndkdlrebk2jogmzo4h5nbmargevuxixx
==> Installing pugixml-1.13-t3rgsp3rvcaylgrz4m4kdxokmmunvkm3 [17/24]
==> No binary for pugixml-1.13-t3rgsp3rvcaylgrz4m4kdxokmmunvkm3 found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/40/40c0b3914ec131485640fa57e55bf1136446026b41db91c1bef678186a12abbe.tar.gz
==> No patches needed for pugixml
==> pugixml: Executing phase: 'cmake'
==> pugixml: Executing phase: 'build'
==> pugixml: Executing phase: 'install'
==> pugixml: Successfully installed pugixml-1.13-t3rgsp3rvcaylgrz4m4kdxokmmunvkm3
Stage: 3.59s. Cmake: 10.70s. Build: 29.19s. Install: 1.39s. Post-install: 1.14s. Total: 47.65s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/pugixml-1.13-t3rgsp3rvcaylgrz4m4kdxokmmunvkm3
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/nlohmann-json-3.11.2-hyjevqal3ghbnnoceh4wwi2reivesccs
==> Installing py-cython-3.0.4-7sdgkmtvjntri7top7bfm2hd5u7drmyc [19/24]
==> No binary for py-cython-3.0.4-7sdgkmtvjntri7top7bfm2hd5u7drmyc found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/2e/2e379b491ee985d31e5faaf050f79f4a8f59f482835906efe4477b33b4fbe9ff.tar.gz
==> No patches needed for py-cython
==> py-cython: Executing phase: 'install'
==> py-cython: Successfully installed py-cython-3.0.4-7sdgkmtvjntri7top7bfm2hd5u7drmyc
Stage: 1m 11.40s. Install: 26m 39.72s. Post-install: 8.41s. Total: 28m 0.92s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-cython-3.0.4-7sdgkmtvjntri7top7bfm2hd5u7drmyc
==> Installing py-pyproject-metadata-0.7.1-fs3vme4uqputh5py6ykygic6maqw3tlh [20/24]
==> No binary for py-pyproject-metadata-0.7.1-fs3vme4uqputh5py6ykygic6maqw3tlh found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/0a/0a94f18b108b9b21f3a26a3d541f056c34edcb17dc872a144a15618fed7aef67.tar.gz
==> No patches needed for py-pyproject-metadata
==> py-pyproject-metadata: Executing phase: 'install'
==> py-pyproject-metadata: Successfully installed py-pyproject-metadata-0.7.1-fs3vme4uqputh5py6ykygic6maqw3tlh
Stage: 2.11s. Install: 28.20s. Post-install: 1.08s. Total: 32.32s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-pyproject-metadata-0.7.1-fs3vme4uqputh5py6ykygic6maqw3tlh
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-tomli-2.0.1-jsxdxnw7umod72hqs44hg5bn5n6dc7ri
==> Installing py-pybind11-2.11.1-zw6zcwehnk2oxdh5576a6cobwgfmcwdp [22/24]
==> No binary for py-pybind11-2.11.1-zw6zcwehnk2oxdh5576a6cobwgfmcwdp found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/d4/d475978da0cdc2d43b73f30910786759d593a9d8ee05b1b6846d1eb16c6d2e0c.tar.gz
==> No patches needed for py-pybind11
==> py-pybind11: Executing phase: 'cmake'
==> py-pybind11: Executing phase: 'build'
==> py-pybind11: Executing phase: 'install'
==> py-pybind11: Successfully installed py-pybind11-2.11.1-zw6zcwehnk2oxdh5576a6cobwgfmcwdp
Stage: 10.05s. Cmake: 8.47s. Build: 0.19s. Install: 2m 24.82s. Post-install: 2.59s. Total: 2m 48.43s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-pybind11-2.11.1-zw6zcwehnk2oxdh5576a6cobwgfmcwdp
==> Installing py-numpy-1.26.1-brmrviclbqnhu4f3swabbqjwk5pjz3yw [23/24]
==> No binary for py-numpy-1.26.1-brmrviclbqnhu4f3swabbqjwk5pjz3yw found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/c8/c8c6c72d4a9f831f328efb1312642a1cafafaa88981d9ab76368d50d07d93cbe.tar.gz
==> Applied patch /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/repos/builtin/packages/py-numpy/check_executables.patch
==> py-numpy: Executing phase: 'install'
==> Error: ProcessError: Command exited with status 1:
'/vol0004/apps/oss/spack-v0.19/opt/spack/linux-rhel8-a64fx/fj-4.8.1/python-3.10.8-7q66snjvhvy7im57hncbgpirmddrb5sk/bin/python3.10' '-m' 'pip' '-vvv' '--no-input' '--no-cache-dir' '--disable-pip-version-check' 'install' '--no-deps' '--ignore-installed' '--no-build-isolation' '--no-warn-script-location' '--no-index' '--prefix=/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-numpy-1.26.1-brmrviclbqnhu4f3swabbqjwk5pjz3yw' '--config-settings=builddir=build' '--config-settings=compile-args=-j16' '--config-settings=setup-args=-Dblas=fjlapackexsve' '--config-settings=setup-args=-Dlapack=fjlapackexsve' '.'

2 errors found in build log:
64
65 Library m found: YES
66 Found CMake: /usr/bin/cmake (3.20.2)
67 WARNING: CMake Toolchain: Failed to determine CMake compilers stat
e
68 Run-time dependency fjlapackexsve found: NO (tried pkgconfig and c
make)
69
>> 70 ../numpy/meson.build:169:4: ERROR: Problem encountered: No BLAS libr
ary detected! Install one, or use the `allow-noblas` build option (n
ote, this may be up to 100x slower for some linear algebra operation
s).
71
72 A full log can be found at /vol0003/rccs-sdt/data/a01008/tmpdir/sp
ack-stage/spack-stage-py-numpy-1.26.1-brmrviclbqnhu4f3swabbqjwk5pjz3
yw/spack-src/build/meson-logs/meson-log.txt
73 error: subprocess-exited-with-error
74
75 × Preparing metadata (pyproject.toml) did not run successfully.
76 │ exit code: 1
77 ╰─> See above for output.
78
79 note: This error originates from a subprocess, and is likely not a
problem with pip.
80 full command: /vol0004/apps/oss/spack-v0.19/opt/spack/linux-rhel8-
a64fx/fj-4.8.1/python-3.10.8-7q66snjvhvy7im57hncbgpirmddrb5sk/bin/py
thon3.10 /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/s
pack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-pip-23.1.2-e5mqkkojghz
4zpl6zboxzql3mko55ccd/lib/python3.10/site-packages/pip/_vendor/pypro
ject_hooks/_in_process/_in_process.py prepare_metadata_for_build_whe
el /data/rccs-sdt/a01008/tmpdir/tmpk5hksrux
81 cwd: /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-
py-numpy-1.26.1-brmrviclbqnhu4f3swabbqjwk5pjz3yw/spack-src
82 Preparing metadata (pyproject.toml): finished with status 'error'
>> 83 error: metadata-generation-failed
84
85 × Encountered error while generating package metadata.
86 ╰─> See above for output.
87
88 note: This is an issue with the package mentioned above, not pip.
89 hint: See above for details.

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-py-numpy-1.26.1-brmrviclbqnhu4f3swabbqjwk5pjz3yw/spack-build-out.txt

==> Warning: Skipping build of arbor-0.9.0-g6ilub43igc5c7gatnm2riwrndedkoq2 since py-numpy-1.26.1-brmrviclbqnhu4f3swabbqjwk5pjz3yw failed
==> Error: arbor-0.9.0-g6ilub43igc5c7gatnm2riwrndedkoq2: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).


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