List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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atom-dft 4.2.6

Compiler Fujitsu Compiler Fujitsu C/C++ Compiler 4.10.0 tcsds-1.2.38
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
==> Warning: config:terminal_title has been replaced by install_status and is ignored
==> Warning: Failed to initialize repository: '$spack/var/spack/repos/local'.
No repo.yaml found in '$spack/var/spack/repos/local'
To remove the bad repository, run this command:
spack repo rm $spack/var/spack/repos/local
[+] /usr (external gmake-4.2.1-eszqmok6vi6wxcmklx6bqloeidbh25kb)
[+] /usr (external autoconf-2.69-titfazaulrbnqxmahzxzof53lmsnabip)
[+] /usr (external automake-1.16.1-fryterkxezzfuo7itm4kijqfnazo5uk4)
[+] /usr (external libtool-2.4.6-c63win5txkc7eap5ppbbjjoaqyj5i6wx)
[+] /usr (external m4-1.4.18-craoyd3hmfdcanz7zxglna5yxcvdtoem)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/gnuconfig-2022-09-17-w33oejhx46ex2iql4orzjqdmt2kdqdb2
==> Installing libgridxc-0.7.6-lp6pvtudtklfp7x7owmuduyb6t2lbd2z [7/9]
==> No binary for libgridxc-0.7.6-lp6pvtudtklfp7x7owmuduyb6t2lbd2z found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/05/058b80f40c85997eea0eae3f15b7cc8105f817e59564106308b22f57a03b216b.tar.gz
==> No patches needed for libgridxc
==> libgridxc: Executing phase: 'edit'
==> libgridxc: Executing phase: 'build'
==> libgridxc: Executing phase: 'install'
==> Error: OSError: No such file or directory: '/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libgridxc-0.7.6-lp6pvtudtklfp7x7owmuduyb6t2lbd2z/libxc.mk'

/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/repos/builtin/packages/libgridxc/package.py:61, in install:
58 os.remove(join_path(self.prefix, "gridxc.mk"))
59 install(
60 join_path(self.prefix, "libxc.mk"),
>> 61 join_path(self.prefix, "share", "org.siesta-project", "libxc.mk"),
62 )
63 os.remove(join_path(self.prefix, "libxc.mk"))

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-libgridxc-0.7.6-lp6pvtudtklfp7x7owmuduyb6t2lbd2z/spack-build-out.txt

==> Warning: Skipping build of atom-dft-4.2.6-ktesvmynu25k57kft3umh46mkbozcnak since libgridxc-0.7.6-lp6pvtudtklfp7x7owmuduyb6t2lbd2z failed
==> Installing xmlf90-1.5.4-fb6caa4ud7aqepemrncwtswwutghwzen [8/9]
==> No binary for xmlf90-1.5.4-fb6caa4ud7aqepemrncwtswwutghwzen found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/a0/a0b1324ff224d5b5ad1127a6ad4f90979f6b127f1a517f98253eea377237bbe4.tar.gz
==> No patches needed for xmlf90
==> xmlf90: Executing phase: 'autoreconf'
==> xmlf90: Executing phase: 'configure'
==> xmlf90: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16' 'V=1'

8 errors found in build log:
501 jwd1384i-s "text.F90", line 3: The module or submodule 'xmlf90_w
xml' that is used directly or indirectly in the module or submodule
'xmlf90_dom' must be available.
502 jwd1173i-s "text.F90", line 9: Derived type definition for 'stri
ng' missing.
503 jwd1498i-s "text.F90", line 9, column 8: 'string' invalid as der
ived type name.
504 jwd2018i-s "text.F90", line 28: When IMPLICIT NONE is specified,
's' must be declared in a type declaration statement.
505 jwd2316i-s "text.F90", line 28, column 12: Types of left and rig
ht sides of assignment conflict.
506 jwd2316i-s "text.F90", line 49, column 12: Types of left and rig
ht sides of assignment conflict.
>> 507 make[3]: *** [Makefile:679: features.o] Error 1
508 make[3]: *** Waiting for unfinished jobs....
>> 509 make[3]: *** [Makefile:679: data.o] Error 1
>> 510 make[3]: *** [Makefile:679: text.o] Error 1
511 frt: -g specified, level of -O changed to 0.
512 Fortran diagnostic messages: program name(m_psdom)
513 jwd1384i-s "m_psdom.f90", line 4: The module or submodule 'xmlf9
0_wxml' that is used directly or indirectly in the module or submod
ule 'xmlf90_dom' must be available.
514 Module subprogram name(getVps)
515 jwd2316i-s "m_psdom.f90", line 21, column 10: Types of left and
right sides of assignment conflict.
516 jwd2316i-s "m_psdom.f90", line 25, column 10: Types of left and
right sides of assignment conflict.

...

527 Module subprogram name(getGrid)
528 jwd2316i-s "m_psdom.f90", line 106, column 10: Types of left and
right sides of assignment conflict.
529 jwd2316i-s "m_psdom.f90", line 109, column 10: Types of left and
right sides of assignment conflict.
530 jwd2316i-s "m_psdom.f90", line 113, column 10: Types of left and
right sides of assignment conflict.
531 jwd2316i-s "m_psdom.f90", line 117, column 10: Types of left and
right sides of assignment conflict.
532 frt: -g specified, level of -O changed to 0.
>> 533 make[3]: *** [Makefile:688: m_psdom.o] Error 1
534 Fortran diagnostic messages: program name(pseudoread)
535 jwd1384i-s "pseudo.F90", line 6: The module or submodule 'xmlf90
_wxml' that is used directly or indirectly in the module or submodu
le 'xmlf90_dom' must be available.
536 jwd1173i-s "pseudo.F90", line 11: Derived type definition for 's
tring' missing.
537 jwd1498i-s "pseudo.F90", line 11, column 6: 'string' invalid as
derived type name.
538 jwd2316i-s "pseudo.F90", line 45, column 3: Types of left and ri
ght sides of assignment conflict.
539 jwd2316i-s "pseudo.F90", line 59, column 6: Types of left and ri
ght sides of assignment conflict.

...

560 jwd2206i-s "pseudo.F90", line 240, column 35: Invalid type, kind
parameter, attribute, or value of actual argument for intrinsic fu
nction 'CHAR'.
561 Internal subprogram name(get_grid_data)
562 jwd2316i-s "pseudo.F90", line 255, column 10: Types of left and
right sides of assignment conflict.
563 jwd2316i-s "pseudo.F90", line 258, column 10: Types of left and
right sides of assignment conflict.
564 jwd2316i-s "pseudo.F90", line 262, column 10: Types of left and
right sides of assignment conflict.
565 jwd2316i-s "pseudo.F90", line 266, column 10: Types of left and
right sides of assignment conflict.
>> 566 make[3]: *** [Makefile:679: pseudo.o] Error 1
567 make[3]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/sp
ack-stage/spack-stage-xmlf90-1.5.4-fb6caa4ud7aqepemrncwtswwutghwzen
/spack-src/doc/Examples/dom'
>> 568 make[2]: *** [Makefile:478: all-recursive] Error 1
569 make[2]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/sp
ack-stage/spack-stage-xmlf90-1.5.4-fb6caa4ud7aqepemrncwtswwutghwzen
/spack-src/doc/Examples'
>> 570 make[1]: *** [Makefile:385: all-recursive] Error 1
571 make[1]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/sp
ack-stage/spack-stage-xmlf90-1.5.4-fb6caa4ud7aqepemrncwtswwutghwzen
/spack-src/doc'
>> 572 make: *** [Makefile:528: all-recursive] Error 1

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-xmlf90-1.5.4-fb6caa4ud7aqepemrncwtswwutghwzen/spack-build-out.txt

==> Error: atom-dft-4.2.6-ktesvmynu25k57kft3umh46mkbozcnak: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).


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