List of Open Source Software which can be built on Fugaku

Spack logo
Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
Please contact us from email:

cotter 20190205

Compiler Fujitsu Compiler Fujitsu C/C++ Compiler 4.10.0 tcsds-1.2.38
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
==> pal: Successfully installed pal-0.9.8-72hek4dggn63af6u2dh3axdrv6fijjj6
Stage: 5.19s. Autoreconf: 0.54s. Configure: 46.08s. Build: 10.29s. Install: 1.48s. Post-install: 1.03s. Total: 1m 5.57s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/pal-0.9.8-72hek4dggn63af6u2dh3axdrv6fijjj6
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/wcslib-7.3-jbynynaxsamopz5btvei5tzissfab7lu
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/flex-2.6.3-udlfzibabfli2hc4lyhfxk7p5xd3pv4f
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/expat-2.5.0-wuv6zzro2s4luf6r3x6zecsjv5ew2xnh
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/python-3.9.18-uhohggeqdyfcvnl74zpcigqpo2clbfsn
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-wheel-0.41.2-6627wx3p5p3o5ff2g4logvzky5hlq736
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-setuptools-68.0.0-xamkqono4xek5docepjmp5yn5xp4t2d4
==> Installing boost-1.66.0-5xonnan4meelph3p3yxqksmkudqdzpoc [37/46]
==> No binary for boost-1.66.0-5xonnan4meelph3p3yxqksmkudqdzpoc found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/cache/_source-cache/archive/57/5721818253e6a0989583192f96782c4a98eb6204965316df9f5ad75819225ca9.tar.bz2
==> Applied patch /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/repos/builtin/packages/boost/python_jam.patch
==> Applied patch /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/repos/builtin/packages/boost/boost_218.patch
==> Ran patch() for boost
==> boost: Executing phase: 'install'
==> Error: ProcessError: Command exited with status 1:
'./b2' 'install' 'threading=multi' '-j' '16' '--user-config=/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-boost-1.66.0-5xonnan4meelph3p3yxqksmkudqdzpoc/spack-src/user-config.jam' 'variant=release' '--disable-icu' '-s' 'BZIP2_INCLUDE=/usr/include' '-s' 'BZIP2_LIBPATH=/usr/lib' '-s' 'ZLIB_INCLUDE=/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3/include' '-s' 'ZLIB_LIBPATH=/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3/lib' '-s' 'LZMA_INCLUDE=/usr/include' '-s' 'LZMA_LIBPATH=/usr/lib' '-s' 'ZSTD_INCLUDE=/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zstd-1.5.5-o7dcxyae4kjgruht44yuloa27ddisxfe/include' '-s' 'ZSTD_LIBPATH=/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zstd-1.5.5-o7dcxyae4kjgruht44yuloa27ddisxfe/lib' 'link=static,shared' '--layout=system' 'toolset=clang' 'cxxstd=98' 'pch=off'

2 errors found in build log:
10896 ^
10897 4 warnings generated.
10898 clang-linux.compile.c++.without-pth bin.v2/libs/python/build/clan
g-gnu-linux/release/cxxstd-98-iso/link-static/pch-off/threadapi-p
thread/threading-multi/converter/arg_to_python_base.o
10899 clang-linux.compile.c++.without-pth bin.v2/libs/python/build/clan
g-gnu-linux/release/cxxstd-98-iso/link-static/pch-off/threadapi-p
thread/threading-multi/errors.o
10900 ...on 11200th target...
10901 clang-linux.compile.c++.without-pth bin.v2/libs/python/build/clan
g-gnu-linux/release/cxxstd-98-iso/link-static/pch-off/threadapi-p
thread/threading-multi/converter/builtin_converters.o
>> 10902 libs/python/src/converter/builtin_converters.cpp:51:14: error: ca
nnot initialize return object of type 'void *' with an rvalue of
type 'const char *'
10903 return PyUnicode_Check(obj) ? _PyUnicode_AsString(obj) : 0;
10904 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
10905 /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/o
pt/spack/linux-rhel8-a64fx/fj-4.10.0/python-3.9.18-uhohggeqdyfcvn
l74zpcigqpo2clbfsn/include/python3.9/unicodeobject.h:115:18: note
: expanded from macro 'PyUnicode_Check'
10906 PyType_FastSubclass(Py_TYPE(op), Py_TPFLAGS_UNIC
ODE_SUBCLASS)
10907 ^
10908 /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/o
pt/spack/linux-rhel8-a64fx/fj-4.10.0/python-3.9.18-uhohggeqdyfcvn
l74zpcigqpo2clbfsn/include/python3.9/object.h:633:41: note: expan
ded from macro 'PyType_FastSubclass'

...

14575 /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/o
pt/spack/linux-rhel8-a64fx/fj-4.10.0/python-3.9.18-uhohggeqdyfcvn
l74zpcigqpo2clbfsn/include/python3.9/pyport.h:508:54: note: expan
ded from macro 'Py_DEPRECATED'
14576 #define Py_DEPRECATED(VERSION_UNUSED) __attribute__((__deprecated
__))
14577 ^
14578 1 warning generated.
14579 clang-linux.compile.c++.without-pth bin.v2/libs/python/build/clan
g-gnu-linux/release/cxxstd-98-iso/pch-off/threadapi-pthread/threa
ding-multi/converter/arg_to_python_base.o
14580 clang-linux.compile.c++.without-pth bin.v2/libs/python/build/clan
g-gnu-linux/release/cxxstd-98-iso/pch-off/threadapi-pthread/threa
ding-multi/converter/builtin_converters.o
>> 14581 libs/python/src/converter/builtin_converters.cpp:51:14: error: ca
nnot initialize return object of type 'void *' with an rvalue of
type 'const char *'
14582 return PyUnicode_Check(obj) ? _PyUnicode_AsString(obj) : 0;
14583 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
14584 /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/o
pt/spack/linux-rhel8-a64fx/fj-4.10.0/python-3.9.18-uhohggeqdyfcvn
l74zpcigqpo2clbfsn/include/python3.9/unicodeobject.h:115:18: note
: expanded from macro 'PyUnicode_Check'
14585 PyType_FastSubclass(Py_TYPE(op), Py_TPFLAGS_UNIC
ODE_SUBCLASS)
14586 ^
14587 /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/o
pt/spack/linux-rhel8-a64fx/fj-4.10.0/python-3.9.18-uhohggeqdyfcvn
l74zpcigqpo2clbfsn/include/python3.9/object.h:633:41: note: expan
ded from macro 'PyType_FastSubclass'

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-boost-1.66.0-5xonnan4meelph3p3yxqksmkudqdzpoc/spack-build-out.txt

==> Warning: Skipping build of aoflagger-2.10.0-j7b7nmzovloqhtdafci5wrfv6fvvugit since boost-1.66.0-5xonnan4meelph3p3yxqksmkudqdzpoc failed
==> Warning: Skipping build of cotter-20190205-dwmvdz2cy75v5cw3tiid2k7cae4io27l since aoflagger-2.10.0-j7b7nmzovloqhtdafci5wrfv6fvvugit failed
==> Warning: Skipping build of casacore-3.5.0-ci5p2hydmxw227m3z5mi7usjqgjx6i7n since boost-1.66.0-5xonnan4meelph3p3yxqksmkudqdzpoc failed
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-pip-23.1.2-bwuwwhvt6tnxjylguv5jncndd6poicfj
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-tomli-2.0.1-nqpz42ibvtbpw6mm7aujxrlvof5gsy2g
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-cython-3.0.4-h2feqqbseqhwrbdk66rr6a54o4ns6p2b
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-packaging-23.1-j3ip5zxxik5wztjb7oojk67ps6cjnn4e
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-pyproject-metadata-0.7.1-6gooyoloyt4bm2al44k33v3jcurlbcwp
==> Installing py-numpy-1.26.1-zrbjrwlglpvcs3pdrnwdinpiogty3nl6 [43/46]
==> No binary for py-numpy-1.26.1-zrbjrwlglpvcs3pdrnwdinpiogty3nl6 found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/cache/_source-cache/archive/c8/c8c6c72d4a9f831f328efb1312642a1cafafaa88981d9ab76368d50d07d93cbe.tar.gz
==> Applied patch /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/repos/builtin/packages/py-numpy/check_executables.patch
==> py-numpy: Executing phase: 'install'
==> Error: ProcessError: Command exited with status 1:
'/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/python-3.9.18-uhohggeqdyfcvnl74zpcigqpo2clbfsn/bin/python3.9' '-m' 'pip' '-vvv' '--no-input' '--no-cache-dir' '--disable-pip-version-check' 'install' '--no-deps' '--ignore-installed' '--no-build-isolation' '--no-warn-script-location' '--no-index' '--prefix=/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-numpy-1.26.1-zrbjrwlglpvcs3pdrnwdinpiogty3nl6' '--config-settings=builddir=build' '--config-settings=compile-args=-j16' '--config-settings=setup-args=-Dblas=fjlapackexsve' '--config-settings=setup-args=-Dlapack=fjlapackexsve' '.'

2 errors found in build log:
64
65 Library m found: YES
66 Found CMake: /usr/bin/cmake (3.20.2)
67 WARNING: CMake Toolchain: Failed to determine CMake compilers stat
e
68 Run-time dependency fjlapackexsve found: NO (tried pkgconfig and c
make)
69
>> 70 ../numpy/meson.build:169:4: ERROR: Problem encountered: No BLAS libr
ary detected! Install one, or use the `allow-noblas` build option (n
ote, this may be up to 100x slower for some linear algebra operation
s).
71
72 A full log can be found at /vol0003/rccs-sdt/data/a01008/tmpdir/sp
ack-stage/spack-stage-py-numpy-1.26.1-zrbjrwlglpvcs3pdrnwdinpiogty3n
l6/spack-src/build/meson-logs/meson-log.txt
73 error: subprocess-exited-with-error
74
75 × Preparing metadata (pyproject.toml) did not run successfully.
76 │ exit code: 1
77 ╰─> See above for output.
78
79 note: This error originates from a subprocess, and is likely not a
problem with pip.
80 full command: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-202
40227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/python-3.9.18-uhoh
ggeqdyfcvnl74zpcigqpo2clbfsn/bin/python3.9 /vol0003/rccs-sdt/data/a0
1008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/f
j-4.10.0/py-pip-23.1.2-bwuwwhvt6tnxjylguv5jncndd6poicfj/lib/python3.
9/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.
py prepare_metadata_for_build_wheel /data/rccs-sdt/a01008/tmpdir/tmp
jlhi6rk0
81 cwd: /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-
py-numpy-1.26.1-zrbjrwlglpvcs3pdrnwdinpiogty3nl6/spack-src
82 Preparing metadata (pyproject.toml): finished with status 'error'
>> 83 error: metadata-generation-failed
84
85 × Encountered error while generating package metadata.
86 ╰─> See above for output.
87
88 note: This is an issue with the package mentioned above, not pip.
89 hint: See above for details.

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-py-numpy-1.26.1-zrbjrwlglpvcs3pdrnwdinpiogty3nl6/spack-build-out.txt

==> Error: cotter-20190205-dwmvdz2cy75v5cw3tiid2k7cae4io27l: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).


<= Back to list