List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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cp2k 2023.2

Compiler Fujitsu Compiler Fujitsu C/C++ Compiler 4.10.0 tcsds-1.2.38
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
==> Warning: config:terminal_title has been replaced by install_status and is ignored
==> Warning: Failed to initialize repository: '$spack/var/spack/repos/local'.
No repo.yaml found in '$spack/var/spack/repos/local'
To remove the bad repository, run this command:
spack repo rm $spack/var/spack/repos/local
[+] /opt/FJSVxtclanga/tcsds-mpi-latest (external fujitsu-mpi-head-3njd5uwuazr4j2no6fqh4cpjmezknh3z)
[+] /usr (external gettext-0.19.8.1-6jl23wn6jpwquhvqibpwhvia7vxsgrq3)
[+] /usr (external ncurses-6.1-a6lc7oq2dlgphtibbpp6x72mqgmscros)
[+] /usr (external perl-5.26.3-rkgbbov2pluaat3kknhtag5ui3vltkqk)
[+] /opt/FJSVxtclanga/tcsds-ssl2-latest (external fujitsu-ssl2-head-7eif42hdxt2tixz7cufiyhj62kz3jntb)
[+] /usr (external gmake-4.2.1-eszqmok6vi6wxcmklx6bqloeidbh25kb)
[+] /usr (external autoconf-2.69-titfazaulrbnqxmahzxzof53lmsnabip)
[+] /usr (external automake-1.16.1-fryterkxezzfuo7itm4kijqfnazo5uk4)
[+] /usr (external bzip2-1.0.6-r4iabrte3nd5eemcd5v5coc3kvsnoyzu)
[+] /usr (external xz-5.2.4-l5cq5xund4a2b3ikazvehpmbiao6srbv)
[+] /usr (external gmp-6.1.2-bdn4t2jwhvr743frsbjwrvaavy5ytp3g)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/gnuconfig-2022-09-17-w33oejhx46ex2iql4orzjqdmt2kdqdb2
[+] /usr (external libtool-2.4.6-c63win5txkc7eap5ppbbjjoaqyj5i6wx)
[+] /vol0004/apps/oss/spack-v0.19/opt/spack/linux-rhel8-a64fx/fj-4.8.1/python-3.10.8-7q66snjvhvy7im57hncbgpirmddrb5sk (external python-3.10.8-zcbuy6dnhwhmsrco46b6ayaywy4nrfcy)
[+] /usr (external pkgconf-1.4.2-mmjuloqcob6vnd6bylwgum67waaa3kht)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zstd-1.5.5-o7dcxyae4kjgruht44yuloa27ddisxfe
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libxc-4.3.4-pmpqzeiuhjkoodrwbcg3p4naxthvjzbo
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/texinfo-7.0.3-vkcp6hi7jyqa2rhdb2chqfqjpdmdk63b
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-fypp-3.1-fwwhxn54wdge6o5gy6bsgnxaapyba5ah
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/boost-1.83.0-fpdkui6yha674j4vqmienjpxohh6fwrs
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/fujitsu-fftw-1.1.0-hahm47ll7fh4v6riv7jhw54ru7w2oh2g
==> Installing libint-2.6.0-c5bouwcv72vdz2hsssobn3mk34fc2f3j [23/24]
==> No binary for libint-2.6.0-c5bouwcv72vdz2hsssobn3mk34fc2f3j found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/cache/_source-cache/archive/4a/4ae47e8f0b5632c3d2a956469a7920896708e9f0e396ec10071b8181e4c8d9fa.tar.gz
==> Ran patch() for libint
==> libint: Executing phase: 'autoreconf'
==> libint: Executing phase: 'configure'
==> libint: Executing phase: 'build'
==> libint: Executing phase: 'install'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16' 'install'

7 errors found in build log:
>> 6 ==> [2024-03-15-18:38:39.473956] PermissionError: [Errno 13] Perm
ission denied: '/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-st
age-libint-2.6.0-c5bouwcv72vdz2hsssobn3mk34fc2f3j/spack-src/bin/c
onfig.sub'
7 ==> [2024-03-15-18:38:40.078260] Find (not recursive): /vol0003/r
ccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/l
inux-rhel8-a64fx/fj-4.10.0/gnuconfig-2022-09-17-w33oejhx46ex2iql4
orzjqdmt2kdqdb2 ['config.sub']
8 ==> [2024-03-15-18:38:40.083151] Find complete: /vol0003/rccs-sdt
/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rh
el8-a64fx/fj-4.10.0/gnuconfig-2022-09-17-w33oejhx46ex2iql4orzjqdm
t2kdqdb2 ['config.sub']
9 ==> [2024-03-15-18:38:40.203248] Copying /vol0003/rccs-sdt/data/a
01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64
fx/fj-4.10.0/gnuconfig-2022-09-17-w33oejhx46ex2iql4orzjqdmt2kdqdb
2/config.sub to /data/rccs-sdt/a01008/tmpdir/spack-stage/spack-st
age-libint-2.6.0-c5bouwcv72vdz2hsssobn3mk34fc2f3j/spack-src/bin/c
onfig.sub
10 ==> libint: Executing phase: 'configure'
11 ==> [2024-03-15-18:38:40.285076] Find (recursive): /data/rccs-sdt
/a01008/tmpdir/spack-stage/spack-stage-libint-2.6.0-c5bouwcv72vdz
2hsssobn3mk34fc2f3j/spack-src ['configure']
12 ==> [2024-03-15-18:38:40.360546] Find complete: /data/rccs-sdt/a0
1008/tmpdir/spack-stage/spack-stage-libint-2.6.0-c5bouwcv72vdz2hs
ssobn3mk34fc2f3j/spack-src ['configure']

...

11339 frt: -g specified, level of -O changed to 0.
11340 /bin/sh ../libtool --quiet --mode=link --tag=CXX /vol0003/
rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/lib/spack/
env/fj/frt -I../include -I../include/libint2 -D__COMPILING_LIBINT
2=1 -g -L../lib -lint2 -lm -L/usr/lib/gcc/aarch64-redhat-linux
/8 -L/opt/FJSVxtclanga/tcsds-1.2.38/bin/../lib64 -lfj90i -lfj90fm
t_sve -lfj90f -lfjsrcinfo -lfjprofcore -lfjprofomp -lmpg -L/usr/l
ib64 -L/opt/FJSVxos/mmm/lib64 -L/opt/FJSVxtclanga/tcsds-1.2.38/bi
n/../lib64/nofjobj -lm -lrt -lpthread -lelf -ldl -o fortran_examp
le fortran_example.o libint_f.o
11341 /usr/bin/install -c -d -m 0755 /vol0003/rccs-sdt/data/a01008/spac
k-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10
.0/libint-2.6.0-c5bouwcv72vdz2hsssobn3mk34fc2f3j/include/libint2/
util/generated
11342 /usr/bin/install -c -m 0644 /vol0003/rccs-sdt/data/a01008/tmpdir/
spack-stage/spack-stage-libint-2.6.0-c5bouwcv72vdz2hsssobn3mk34fc
2f3j/spack-src/generated/./include/libint2/util/generated/*.h /vo
l0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/
spack/linux-rhel8-a64fx/fj-4.10.0/libint-2.6.0-c5bouwcv72vdz2hsss
obn3mk34fc2f3j/include/libint2/util/generated
11343 if test "X1" = "X0"; then `gunzip -c /vol0003/rccs-sdt/data/a0100
8/tmpdir/spack-stage/spack-stage-libint-2.6.0-c5bouwcv72vdz2hssso
bn3mk34fc2f3j/spack-src/generated/./external/boost.tar.gz | tar -
xf - -C /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227
/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libint-2.6.0-c5bouwc
v72vdz2hsssobn3mk34fc2f3j/include/libint2`; fi
11344 /usr/lib64/crt1.o: In function `_start':
>> 11345 (.text+0x18): undefined reference to `main'
>> 11346 (.text+0x1c): undefined reference to `main'
>> 11347 (.text+0x20): undefined reference to `main'
>> 11348 (.text+0x24): undefined reference to `main'
>> 11349 make[1]: *** [Makefile:35: fortran_example] Error 1
11350 make[1]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/
spack-stage/spack-stage-libint-2.6.0-c5bouwcv72vdz2hsssobn3mk34fc
2f3j/spack-src/generated/fortran'
>> 11351 make: *** [Makefile:38: fortran] Error 1

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-libint-2.6.0-c5bouwcv72vdz2hsssobn3mk34fc2f3j/spack-build-out.txt

==> Warning: Skipping build of cp2k-7.1-sz72j7p2t5r4wtgriica4uatqdsk3bhm since libint-2.6.0-c5bouwcv72vdz2hsssobn3mk34fc2f3j failed
==> Error: cp2k-7.1-sz72j7p2t5r4wtgriica4uatqdsk3bhm: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).


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