List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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drishti 0.4

Compiler Fujitsu Compiler Fujitsu C/C++ Compiler 4.10.0 tcsds-1.2.38
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
To remove the bad repository, run this command:
spack repo rm $spack/var/spack/repos/local
==> Warning: using "openssl@1.1.1k" which is a deprecated version
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3
[+] /usr (external libffi-3.1-t3pvneonzixzuuslyi77hvdmtpiwcmnn)
[+] /vol0004/apps/oss/spack-v0.19/opt/spack/linux-rhel8-a64fx/fj-4.8.1/python-3.10.8-7q66snjvhvy7im57hncbgpirmddrb5sk (external python-3.10.8-zcbuy6dnhwhmsrco46b6ayaywy4nrfcy)
[+] /usr (external curl-7.61.1-qsvgylcys5hkzdnl2pdh4blrprxlsp5m)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libmd-1.0.4-c6kxvz3uxe2gfan53cddxzubiobsk6j7
[+] /usr (external gettext-0.19.8.1-6jl23wn6jpwquhvqibpwhvia7vxsgrq3)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libiconv-1.17-nh4rfr3f3pcowrx2xcn2l45yyfy3xzk6
[+] /usr (external openssl-1.1.1k-bprmjv6lxavt4jwalf6ucpmia7oubuqp)
[+] /usr (external libedit-3.1-ux4kuci6bussthhfjp5hadpzdjflft7e)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libxcrypt-4.4.35-65qqdcyvorz4uxet3cq2e4zxyakt757n
[+] /usr (external ncurses-6.1-a6lc7oq2dlgphtibbpp6x72mqgmscros)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/pcre2-10.42-6kbyqamjjurixzzgishkv3abmew2p6xx
[+] /usr (external perl-5.26.3-rkgbbov2pluaat3kknhtag5ui3vltkqk)
[+] /usr (external freetype-2.9.1-cauabtwo5dqzdbkssgtqnfqanh6djcyx)
[+] /usr (external libpng-1.6.34-xtms7s6d3iod6ac4f3fps6a5ksxtwdpa)
[+] /usr (external pkgconf-1.4.2-mmjuloqcob6vnd6bylwgum67waaa3kht)
[+] /opt/FJSVxtclanga/tcsds-ssl2-latest (external fujitsu-ssl2-head-7eif42hdxt2tixz7cufiyhj62kz3jntb)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libjpeg-turbo-3.0.0-isdeykvaxqsqvht7e4gy4u4and66oeo7
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/qhull-2020.2-crafeoakrsapugv7vdsdr5gnesptbobk
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/darshan-util-3.4.4-zxudea35rkiw4auc2naaflldhpgxnzcs
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-fonttools-4.39.4-apzzrvjufk4muyjawuwx5lbame5td7v6
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-pybind11-2.11.1-zw6zcwehnk2oxdh5576a6cobwgfmcwdp
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-wheel-0.41.2-uecnqi7ns7hm2wehm3fwrq4fyygklprs
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/ninja-1.11.1-hkoahomauz36ql3b7gyr3bbjctk3swkj
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-setuptools-68.0.0-umhokgnekqyzlgjhl6pifea67uvzwnge
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-pip-23.1.2-e5mqkkojghz4zpl6zboxzql3mko55ccd
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libbsd-0.11.7-ovlcn2spf2nziz5itskfcmtdbqscyqii
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libunistring-1.1-z2viquc3scbkaqsvmebdltlkex4g3zxv
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/krb5-1.20.1-pfm5v36cpu3abc64n3swyxhjvvtjion3
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-pathspec-0.11.1-yfi5zenc4dmcp7jwhsn52hvp7ekzvfal
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-tomli-2.0.1-jsxdxnw7umod72hqs44hg5bn5n6dc7ri
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-cython-0.29.36-samzl4hunnfirzddufylooccm35ucxki
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-pygments-2.16.1-brrayglatfj64mhyd7fbumkq6jik7qw4
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-editables-0.3-tjgzhmdzqnwsghjmimngdcedsxnajr4v
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-certifi-2023.7.22-ozdat7skdtwlgvqa3izx45wdprkhcdm6
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-pluggy-1.0.0-43u5s6ng6upxptdeshqrdqpcuki34yfp
==> Installing py-commonmark-0.9.1-3x63egvmidqyczkalpwqabyifc7oikmc [37/75]
==> No binary for py-commonmark-0.9.1-3x63egvmidqyczkalpwqabyifc7oikmc found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/45/452f9dc859be7f06631ddcb328b6919c67984aca654e5fefb3914d54691aed60.tar.gz
==> No patches needed for py-commonmark
==> py-commonmark: Executing phase: 'install'
==> py-commonmark: Successfully installed py-commonmark-0.9.1-3x63egvmidqyczkalpwqabyifc7oikmc
Stage: 2.38s. Install: 44.26s. Post-install: 1.26s. Total: 48.76s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-commonmark-0.9.1-3x63egvmidqyczkalpwqabyifc7oikmc
==> Installing py-setuptools-63.4.3-snzpjtzdz563ivlypxuqy7n6ualcx4c4 [38/75]
==> No binary for py-setuptools-63.4.3-snzpjtzdz563ivlypxuqy7n6ualcx4c4 found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/7f/7f61f7e82647f77d4118eeaf43d64cbcd4d87e38af9611694d4866eb070cd10d
==> No patches needed for py-setuptools
==> py-setuptools: Executing phase: 'install'
==> py-setuptools: Successfully installed py-setuptools-63.4.3-snzpjtzdz563ivlypxuqy7n6ualcx4c4
Stage: 1.96s. Install: 20.92s. Post-install: 8.25s. Total: 31.56s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-setuptools-63.4.3-snzpjtzdz563ivlypxuqy7n6ualcx4c4
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-packaging-23.1-yxzztmamwtgtkjqep4mb57ht6ztozn7a
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-six-1.16.0-ztq6x5ahyilyk723qkmrff772hjcllpa
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-typing-extensions-4.8.0-knpphsnzvlaujfp7d76yy3ezradxkd5z
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-kiwisolver-1.4.5-alf7dg76w6xizccrqddoxatrfua5hbyw
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-trove-classifiers-2023.8.7-2zb3tnmb6pjgxwjefhthnpq75o2jwik3
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-pillow-10.0.0-ywh46f5x74warwd5tthvjqvzvtanusm5
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-cycler-0.11.0-fiqjq76lja3xb3m3kgjwbptkuripevdx
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-poetry-core-1.6.1-qstf3ucqmeqqfovcylf7ofic5icb5dt6
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-pytz-2023.3-7g3i5s3pnpmdspxhhfo2mestraecwsh6
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-markupsafe-2.1.3-4ye3dlarji2cdrspmd37ndvo6u2umnko
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-pyparsing-3.0.9-x5syhgdsq2rgfco4tamxymq5hxzr2z42
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-flit-core-3.9.0-lhqbfzqsivqiam6fjx4jzplzv2r3wvbi
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-pycparser-2.21-ar2zoolyesw6gwnewldzopj3kolkjuhn
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/expat-2.5.0-wuv6zzro2s4luf6r3x6zecsjv5ew2xnh
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libidn2-2.3.4-cws54xc6xf6dzygzoag7dpjsr6ryuj5y
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/openssh-9.5p1-wyv7tnktdkjotkyki336dwdsjkyoc757
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-versioneer-0.29-7ely3ypn6gsl4b6q4yzfm6fzca3ecmfo
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-pyproject-metadata-0.7.1-fs3vme4uqputh5py6ykygic6maqw3tlh
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-python-dateutil-2.8.2-aj4jw5b3skcdcl37umot4ovqikyfjwjq
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-hatchling-1.18.0-5uohiadufofnslsxcwbslmyrvl5xwkmf
==> Installing py-rich-12.5.1-5wrpvasngqghejvassothxh7r4kicimv [59/75]
==> No binary for py-rich-12.5.1-5wrpvasngqghejvassothxh7r4kicimv found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/63/63a5c5ce3673d3d5fbbf23cd87e11ab84b6b451436f1b7f19ec54b6bc36ed7ca.tar.gz
==> No patches needed for py-rich
==> py-rich: Executing phase: 'install'
==> py-rich: Successfully installed py-rich-12.5.1-5wrpvasngqghejvassothxh7r4kicimv
Stage: 3.58s. Install: 24.89s. Post-install: 3.39s. Total: 32.90s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-rich-12.5.1-5wrpvasngqghejvassothxh7r4kicimv
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-mako-1.2.4-m2hng5c6l7fsrv733z3thbrafxfrtlxj
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-cffi-1.15.1-djctwe5slsxra7w5frnix6dfwza6254i
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/git-2.42.0-dwkradysco77qa5hmcp5ciqvhb3sfcuu
==> Installing py-numpy-1.26.1-lfjg3fewnwt3u4cqwndtt7mluq3bz7yw [63/75]
==> No binary for py-numpy-1.26.1-lfjg3fewnwt3u4cqwndtt7mluq3bz7yw found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/cache/_source-cache/archive/c8/c8c6c72d4a9f831f328efb1312642a1cafafaa88981d9ab76368d50d07d93cbe.tar.gz
==> Applied patch /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/repos/builtin/packages/py-numpy/check_executables.patch
==> py-numpy: Executing phase: 'install'
==> Error: ProcessError: Command exited with status 1:
'/vol0004/apps/oss/spack-v0.19/opt/spack/linux-rhel8-a64fx/fj-4.8.1/python-3.10.8-7q66snjvhvy7im57hncbgpirmddrb5sk/bin/python3.10' '-m' 'pip' '-vvv' '--no-input' '--no-cache-dir' '--disable-pip-version-check' 'install' '--no-deps' '--ignore-installed' '--no-build-isolation' '--no-warn-script-location' '--no-index' '--prefix=/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-numpy-1.26.1-lfjg3fewnwt3u4cqwndtt7mluq3bz7yw' '--config-settings=builddir=build' '--config-settings=compile-args=-j16' '--config-settings=setup-args=-Dblas=fjlapackexsve' '--config-settings=setup-args=-Dlapack=fjlapackexsve' '.'

2 errors found in build log:
64
65 Library m found: YES
66 Found CMake: /usr/bin/cmake (3.20.2)
67 WARNING: CMake Toolchain: Failed to determine CMake compilers stat
e
68 Run-time dependency fjlapackexsve found: NO (tried pkgconfig and c
make)
69
>> 70 ../numpy/meson.build:169:4: ERROR: Problem encountered: No BLAS libr
ary detected! Install one, or use the `allow-noblas` build option (n
ote, this may be up to 100x slower for some linear algebra operation
s).
71
72 A full log can be found at /vol0003/rccs-sdt/data/a01008/tmpdir/sp
ack-stage/spack-stage-py-numpy-1.26.1-lfjg3fewnwt3u4cqwndtt7mluq3bz7
yw/spack-src/build/meson-logs/meson-log.txt
73 error: subprocess-exited-with-error
74
75 × Preparing metadata (pyproject.toml) did not run successfully.
76 │ exit code: 1
77 ╰─> See above for output.
78
79 note: This error originates from a subprocess, and is likely not a
problem with pip.
80 full command: /vol0004/apps/oss/spack-v0.19/opt/spack/linux-rhel8-
a64fx/fj-4.8.1/python-3.10.8-7q66snjvhvy7im57hncbgpirmddrb5sk/bin/py
thon3.10 /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/s
pack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-pip-23.1.2-e5mqkkojghz
4zpl6zboxzql3mko55ccd/lib/python3.10/site-packages/pip/_vendor/pypro
ject_hooks/_in_process/_in_process.py prepare_metadata_for_build_whe
el /data/rccs-sdt/a01008/tmpdir/tmpoe_22vv4
81 cwd: /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-
py-numpy-1.26.1-lfjg3fewnwt3u4cqwndtt7mluq3bz7yw/spack-src
82 Preparing metadata (pyproject.toml): finished with status 'error'
>> 83 error: metadata-generation-failed
84
85 × Encountered error while generating package metadata.
86 ╰─> See above for output.
87
88 note: This is an issue with the package mentioned above, not pip.
89 hint: See above for details.

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-py-numpy-1.26.1-lfjg3fewnwt3u4cqwndtt7mluq3bz7yw/spack-build-out.txt

==> Warning: Skipping build of py-matplotlib-3.8.1-vqnv3n3seepbw3htgj3utzachbaskjjm since py-numpy-1.26.1-lfjg3fewnwt3u4cqwndtt7mluq3bz7yw failed
==> Warning: Skipping build of py-seaborn-0.12.2-ytjd7nv4uewasnr45co34beh6liiqp3v since py-matplotlib-3.8.1-vqnv3n3seepbw3htgj3utzachbaskjjm failed
==> Warning: Skipping build of py-darshan-3.4.4.0-fuhdoylttzbptd4u45omegjdgiy3ufr7 since py-seaborn-0.12.2-ytjd7nv4uewasnr45co34beh6liiqp3v failed
==> Warning: Skipping build of drishti-0.4-a57rar4wwzqrke2r3fzef45ftra5wap6 since py-darshan-3.4.4.0-fuhdoylttzbptd4u45omegjdgiy3ufr7 failed
==> Warning: Skipping build of py-contourpy-1.0.7-cxhfzbu7pysks2ap5lokvqftyk5fvb3l since py-numpy-1.26.1-lfjg3fewnwt3u4cqwndtt7mluq3bz7yw failed
==> Warning: Skipping build of py-pandas-1.5.3-ktebclieg6ttamachbavm22wrxiqzijw since py-numpy-1.26.1-lfjg3fewnwt3u4cqwndtt7mluq3bz7yw failed
==> Warning: Skipping build of py-bottleneck-1.3.7-lsiwlfri5p3ak2fli6cew25t5lovm2af since py-numpy-1.26.1-lfjg3fewnwt3u4cqwndtt7mluq3bz7yw failed
==> Warning: Skipping build of py-numexpr-2.8.4-crtnbjyjucdyh4hottaagjcykbcssfha since py-numpy-1.26.1-lfjg3fewnwt3u4cqwndtt7mluq3bz7yw failed
==> Error: error parsing database:
[Errno 2] No such file or directory: '/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/.spack-db/index.json'


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