List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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eq-r 1.0

Compiler Fujitsu Compiler Fujitsu C/C++ Compiler 4.10.0 tcsds-1.2.38
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
==> Warning: config:terminal_title has been replaced by install_status and is ignored
==> Warning: Failed to initialize repository: '$spack/var/spack/repos/local'.
No repo.yaml found in '$spack/var/spack/repos/local'
To remove the bad repository, run this command:
spack repo rm $spack/var/spack/repos/local
[+] /usr (external autoconf-2.69-titfazaulrbnqxmahzxzof53lmsnabip)
[+] /usr (external automake-1.16.1-fryterkxezzfuo7itm4kijqfnazo5uk4)
[+] /opt/FJSVxtclanga/tcsds-mpi-latest (external fujitsu-mpi-head-3njd5uwuazr4j2no6fqh4cpjmezknh3z)
[+] /usr (external gmake-4.2.1-eszqmok6vi6wxcmklx6bqloeidbh25kb)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/gnuconfig-2022-09-17-w33oejhx46ex2iql4orzjqdmt2kdqdb2
[+] /usr (external libtool-2.4.6-c63win5txkc7eap5ppbbjjoaqyj5i6wx)
[+] /usr (external m4-1.4.18-craoyd3hmfdcanz7zxglna5yxcvdtoem)
[+] /usr (external bzip2-1.0.6-r4iabrte3nd5eemcd5v5coc3kvsnoyzu)
[+] /usr (external curl-7.61.1-5sv4yeurlt3xoijvnvyhq2f6lbhsfnfo)
[+] /usr (external ncurses-6.1-a6lc7oq2dlgphtibbpp6x72mqgmscros)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/openjdk-11.0.20.1_1-tnugcuel3ph3a3rlqpfirhqh64m7irjl
[+] /usr (external readline-7.0-e42rjj4i2akf22cltht7kf2fuxvhok62)
[+] /usr (external xz-5.2.4-l5cq5xund4a2b3ikazvehpmbiao6srbv)
[+] /usr (external tcl-8.6.8-harexvrx3mzabr3wdbpimw5tbwmvsp3v)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/pcre2-10.42-6kbyqamjjurixzzgishkv3abmew2p6xx
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/icu4c-67.1-prohcvaexxjybkpiitbemdbce2yunqmo
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/which-2.21-whaiaoop4ssuqqj2liwkmwo4etlyyc52
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/swig-4.1.1-krn47misz4rokhqg4vsn7pyz55cu625z
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/r-4.3.0-e2kmfv2xhv67e5xxdvt4xlpswqw7q26t
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/r-rcpp-1.0.10-nj6vezeniwcuaqcoiblry5qqrer5qizv
==> Installing r-rinside-0.2.18-i7s2f5butsnohoswe4zg3rdefob442aa [22/23]
==> No binary for r-rinside-0.2.18-i7s2f5butsnohoswe4zg3rdefob442aa found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/80/805014f0f0a364633e0e3c59100665a089bc455dec80b24f04aaec96466cb736.tar.gz
==> No patches needed for r-rinside
==> r-rinside: Executing phase: 'install'
==> r-rinside: Successfully installed r-rinside-0.2.18-i7s2f5butsnohoswe4zg3rdefob442aa
Stage: 5.15s. Install: 1m 3.15s. Post-install: 2.52s. Total: 1m 13.94s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/r-rinside-0.2.18-i7s2f5butsnohoswe4zg3rdefob442aa
==> Installing eq-r-1.0-ytf3l6em6je656q7mdf73i3czttsc7w4 [23/23]
==> No binary for eq-r-1.0-ytf3l6em6je656q7mdf73i3czttsc7w4 found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/68/68047cb0edf088eaaefc5e36cefda9818292e5c832593e10a1dd9c73c27661b6.tar.gz
==> No patches needed for eq-r
==> eq-r: Executing phase: 'autoreconf'
==> eq-r: Executing phase: 'configure'
==> eq-r: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16' 'V=1'

1 error found in build log:
89 swig -c++ -pkgversion 0.1 EQR.i
90 CC -c -g -O0 -fPIC -std=c++0x -I/usr/include -I/vol0003/rccs-sdt/dat
a/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64
fx/fj-4.10.0/r-4.3.0-e2kmfv2xhv67e5xxdvt4xlpswqw7q26t/rlib/R/include
-I/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/o
pt/spack/linux-rhel8-a64fx/fj-4.10.0/r-rcpp-1.0.10-nj6vezeniwcuaqcoi
blry5qqrer5qizv/rlib/R/library/Rcpp/include -I/vol0003/rccs-sdt/data
/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64f
x/fj-4.10.0/r-rinside-0.2.18-i7s2f5butsnohoswe4zg3rdefob442aa/rlib/R
/library/RInside/include -g -O0 -fPIC -std=c++0x -I/usr/include -I/
vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/s
pack/linux-rhel8-a64fx/fj-4.10.0/r-4.3.0-e2kmfv2xhv67e5xxdvt4xlpswqw
7q26t/rlib/R/include -I/vol0003/rccs-sdt/data/a01008/spack-all-test/
env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/r-rcpp-1.0.
10-nj6vezeniwcuaqcoiblry5qqrer5qizv/rlib/R/library/Rcpp/include -I/v
ol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/sp
ack/linux-rhel8-a64fx/fj-4.10.0/r-rinside-0.2.18-i7s2f5butsnohoswe4z
g3rdefob442aa/rlib/R/library/RInside/include \
91 EQR.cpp
92 swig error : Unrecognized option -pkgversion
93 swig error : Unrecognized option 0.1
94 Use 'swig -help' for available options.
>> 95 make: *** [Makefile:19: EQR_wrap.cxx] Error 1
96 make: *** Waiting for unfinished jobs....

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-eq-r-1.0-ytf3l6em6je656q7mdf73i3czttsc7w4/spack-build-out.txt


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