Spack will be used to manage open source software packages on Fugaku.
Fugaku users can easily use pre-installed packages and built packages based on Spack recipes.
The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes.
Note that the results in this list do not guarantee that each package will work properly.
On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
|
Compiler | Fujitsu Compiler Fujitsu C/C++ Compiler 4.10.0 tcsds-1.2.38 |
---|---|
Result | Dependency Error |
Failed to install dependency package :
------------------------------------------------
==> Warning: config:terminal_title has been replaced by install_status and is ignored
==> Warning: Failed to initialize repository: '$spack/var/spack/repos/local'.
No repo.yaml found in '$spack/var/spack/repos/local'
To remove the bad repository, run this command:
spack repo rm $spack/var/spack/repos/local
[+] /opt/FJSVxtclanga/tcsds-mpi-latest (external fujitsu-mpi-head-3njd5uwuazr4j2no6fqh4cpjmezknh3z)
[+] /usr (external gmake-4.2.1-eszqmok6vi6wxcmklx6bqloeidbh25kb)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/gnuconfig-2022-09-17-w33oejhx46ex2iql4orzjqdmt2kdqdb2
==> Installing exabayes-1.5.1-byum4mx7zp6gyz3ytq2cp3lapjbjpyiy [4/4]
==> No binary for exabayes-1.5.1-byum4mx7zp6gyz3ytq2cp3lapjbjpyiy found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/f7/f75ce8d5cee4d241cadacd0f5f5612d783b9e9babff2a99c7e0c3819a94bbca9.tar.gz
==> No patches needed for exabayes
==> exabayes: Executing phase: 'autoreconf'
==> exabayes: Executing phase: 'configure'
==> exabayes: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16' 'V=1'
2 errors found in build log:
118 config.status: executing depfiles commands
119 ==> [2024-03-16-03:04:44.712036] Find (recursive): /data/rccs-sdt/a
01008/tmpdir/spack-stage/spack-stage-exabayes-1.5.1-byum4mx7zp6gyz3
ytq2cp3lapjbjpyiy/spack-src ['libtool']
120 ==> [2024-03-16-03:04:45.443724] Find complete: /data/rccs-sdt/a010
08/tmpdir/spack-stage/spack-stage-exabayes-1.5.1-byum4mx7zp6gyz3ytq
2cp3lapjbjpyiy/spack-src ['libtool']
121 ==> exabayes: Executing phase: 'build'
122 ==> [2024-03-16-03:04:45.548218] 'make' '-j16' 'V=1'
123 /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/lib
/spack/env/fj/fcc -DHAVE_CONFIG_H -I. -I/data/rccs-sdt/a01008/tmpdi
r/spack-stage/spack-stage-exabayes-1.5.1-byum4mx7zp6gyz3ytq2cp3lapj
bjpyiy/spack-src -I./src -D_GNU_SOURCE -fomit-frame-pointer -fun
roll-loops -D__STRICT_ANSI__ -Wall -Wextra -pedantic -Wcast-qual -
Wcomment -Wconversion -Wdisabled-optimization -Wfloat-equal -Wforma
t -Wformat=2 -Wformat-security -Winit-self -Winline -Winvalid-pch -
Wmissing-braces -Wmissing-include-dirs -Wparentheses -Wpointer-arit
h -Wreturn-type -Wsequence-point -Wshadow -Wsign-compare -Wstrict-a
liasing -Wstrict-aliasing=2 -Wswitch -Wtrigraphs -Wuninitialized -W
unknown-pragmas -Wwrite-strings -Wunused -Wunused-function -Wunused
-variable -Wreturn-type -Wmissing-declarations -Wundef -Wno-unused-
parameter -Wno-sign-conversion -Wno-unknown-pragmas -Wno-inline -Wc
ast-align -Wchar-subscripts -Wformat-nonliteral -Wformat-y2k -Wimpo
rt -Wmissing-field-initializers -Wmissing-format-attribute -Wpack
ed -Wredundant-decls -Wstack-protector -Wswitch-default -Wswitch-en
um -Wunreachable-code -Wvariadic-macros -Wvolatile-register-var -Wu
nused-label -Wunused-value -Wint-to-pointer-cast -Wno-suggest-attri
bute=noreturn -Wno-unknown-warning-option -Wno-unknown-warning -Wno
-missing-noreturn -std=c99 -march=native -mtune=native -w -O2 -I/
data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-exabayes-1.5.1-
byum4mx7zp6gyz3ytq2cp3lapjbjpyiy/spack-src/src -I/data/rccs-sdt/a01
008/tmpdir/spack-stage/spack-stage-exabayes-1.5.1-byum4mx7zp6gyz3yt
q2cp3lapjbjpyiy/spack-src/src/contrib -I/data/rccs-sdt/a01008/tmpdi
r/spack-stage/spack-stage-exabayes-1.5.1-byum4mx7zp6gyz3ytq2cp3lapj
bjpyiy/spack-src/src/system -I/data/rccs-sdt/a01008/tmpdir/spack-st
age/spack-stage-exabayes-1.5.1-byum4mx7zp6gyz3ytq2cp3lapjbjpyiy/spa
ck-src/src/proposals -I/data/rccs-sdt/a01008/tmpdir/spack-stage/spa
ck-stage-exabayes-1.5.1-byum4mx7zp6gyz3ytq2cp3lapjbjpyiy/spack-src/
src/proposals/param-proposers -I/data/rccs-sdt/a01008/tmpdir/spack-
stage/spack-stage-exabayes-1.5.1-byum4mx7zp6gyz3ytq2cp3lapjbjpyiy/s
pack-src/src/proposals/topo-proposers -I/data/rccs-sdt/a01008/tmpdi
r/spack-stage/spack-stage-exabayes-1.5.1-byum4mx7zp6gyz3ytq2cp3lapj
bjpyiy/spack-src/src/config -I/data/rccs-sdt/a01008/tmpdir/spack-st
age/spack-stage-exabayes-1.5.1-byum4mx7zp6gyz3ytq2cp3lapjbjpyiy/spa
ck-src/src/file -I/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-st
age-exabayes-1.5.1-byum4mx7zp6gyz3ytq2cp3lapjbjpyiy/spack-src/src/m
cmc -I/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-exabayes
-1.5.1-byum4mx7zp6gyz3ytq2cp3lapjbjpyiy/spack-src/src/eval -I/data/
rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-exabayes-1.5.1-byum4
mx7zp6gyz3ytq2cp3lapjbjpyiy/spack-src/src/data-struct -I/data/rccs-
sdt/a01008/tmpdir/spack-stage/spack-stage-exabayes-1.5.1-byum4mx7zp
6gyz3ytq2cp3lapjbjpyiy/spack-src/src/priors -I/data/rccs-sdt/a01008
/tmpdir/spack-stage/spack-stage-exabayes-1.5.1-byum4mx7zp6gyz3ytq2c
p3lapjbjpyiy/spack-src/src/tree-parse -I/data/rccs-sdt/a01008/tmpdi
r/spack-stage/spack-stage-exabayes-1.5.1-byum4mx7zp6gyz3ytq2cp3lapj
bjpyiy/spack-src/src/model -I/data/rccs-sdt/a01008/tmpdir/spack-sta
ge/spack-stage-exabayes-1.5.1-byum4mx7zp6gyz3ytq2cp3lapjbjpyiy/spac
k-src/src/math -I/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-sta
ge-exabayes-1.5.1-byum4mx7zp6gyz3ytq2cp3lapjbjpyiy/spack-src/src/pa
rameters -I/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-exa
bayes-1.5.1-byum4mx7zp6gyz3ytq2cp3lapjbjpyiy/spack-src/src/branches
-I/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-exabayes-1
.5.1-byum4mx7zp6gyz3ytq2cp3lapjbjpyiy/spack-src/src/comm/ -I/data/r
ccs-sdt/a01008/tmpdir/spack-stage/spack-stage-exabayes-1.5.1-byum4m
x7zp6gyz3ytq2cp3lapjbjpyiy/spack-src/src/comm/threads -MT ./src
/libpll_a-avxConditional.o -MD -MP -MF ./src/.deps/libpll_a-avxCond
itional.Tpo -c -o ./src/libpll_a-avxConditional.o `test -f './src/a
vxConditional.c' || echo '/data/rccs-sdt/a01008/tmpdir/spack-stage/
spack-stage-exabayes-1.5.1-byum4mx7zp6gyz3ytq2cp3lapjbjpyiy/spack-s
rc/'`./src/avxConditional.c
>> 124 clang-7: error: the clang compiler does not support '-march=native'
>> 125 make: *** [Makefile:2784: src/libpll_a-avxConditional.o] Error 1
See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-exabayes-1.5.1-byum4mx7zp6gyz3ytq2cp3lapjbjpyiy/spack-build-out.txt