List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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exawind master

Compiler Fujitsu Compiler Fujitsu C/C++ Compiler 4.10.0 tcsds-1.2.38
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
==> Warning: config:terminal_title has been replaced by install_status and is ignored
==> Warning: Failed to initialize repository: '$spack/var/spack/repos/local'.
No repo.yaml found in '$spack/var/spack/repos/local'
To remove the bad repository, run this command:
spack repo rm $spack/var/spack/repos/local
[+] /usr (external curl-7.61.1-qsvgylcys5hkzdnl2pdh4blrprxlsp5m)
[+] /usr (external ncurses-6.1-a6lc7oq2dlgphtibbpp6x72mqgmscros)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3
[+] /opt/FJSVxtclanga/tcsds-mpi-latest (external fujitsu-mpi-head-3njd5uwuazr4j2no6fqh4cpjmezknh3z)
[+] /usr (external gmake-4.2.1-eszqmok6vi6wxcmklx6bqloeidbh25kb)
[+] /opt/FJSVxtclanga/tcsds-ssl2-latest (external fujitsu-ssl2-head-7eif42hdxt2tixz7cufiyhj62kz3jntb)
[+] /usr (external bzip2-1.0.6-r4iabrte3nd5eemcd5v5coc3kvsnoyzu)
[+] /usr (external lz4-1.8.3-ldbpdr7ujm6p5vdasnwd2ujsioqi34gf)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/gnuconfig-2022-09-17-w33oejhx46ex2iql4orzjqdmt2kdqdb2
[+] /usr (external pkgconf-1.4.2-mmjuloqcob6vnd6bylwgum67waaa3kht)
[+] /usr (external libxml2-2.9.7-psbfksllqwmljlwwnb24enmihejo6ws6)
==> Installing boost-1.83.0-3vrcme6jafe7xzytarvbmrtqus7njo64 [12/34]
==> No binary for boost-1.83.0-3vrcme6jafe7xzytarvbmrtqus7njo64 found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/cache/_source-cache/archive/64/6478edfe2f3305127cffe8caf73ea0176c53769f4bf1585be237eb30798c3b8e.tar.bz2
==> Applied patch /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/repos/builtin/packages/boost/fujitsu_version_analysis-1.77.patch
==> Applied patch /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/repos/builtin/packages/boost/bootstrap-compiler.patch
==> Ran patch() for boost
==> boost: Executing phase: 'install'
==> boost: Successfully installed boost-1.83.0-3vrcme6jafe7xzytarvbmrtqus7njo64
Stage: 45m 33.27s. Install: 33m 33.92s. Post-install: 21m 6.59s. Total: 1h 40m 18.07s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/boost-1.83.0-3vrcme6jafe7xzytarvbmrtqus7njo64
[+] /usr (external hwloc-2.2.0-uek4abd3fnx3x4ulqymndgwqr7ib3cu3)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/cmake-3.27.7-ussgjuqkqbxi5dcv7kbp6bugdcjc5ph6
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zstd-1.5.5-o7dcxyae4kjgruht44yuloa27ddisxfe
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/hypre-2.29.0-pulbknhgg67oo7ewszuxtqpteyaaz4mk
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/parallel-netcdf-1.12.3-jwyav35aazcub2vfdct6o6wojojci5iw
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libaec-1.0.6-5mds5a4x6u7m2ysxqxxgm2l6tpax77ds
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/hdf5-1.14.3-46bpm4dbjw4wlfxjwd56aweppb6bzneo
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/metis-5.1.0-6d55bzb64ehuzmkjpsj7dpvuf4pdrfri
==> Installing tioga-develop-6rtbks3jgkrse3rnkindefoekzarmxaw [21/34]
==> No binary for tioga-develop-6rtbks3jgkrse3rnkindefoekzarmxaw found: installing from source
==> No patches needed for tioga
==> tioga: Executing phase: 'cmake'
==> tioga: Executing phase: 'build'
==> tioga: Executing phase: 'install'
==> tioga: Successfully installed tioga-develop-6rtbks3jgkrse3rnkindefoekzarmxaw
Stage: 7.30s. Cmake: 23.19s. Build: 45.49s. Install: 4.90s. Post-install: 3.56s. Total: 1m 27.31s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/tioga-develop-6rtbks3jgkrse3rnkindefoekzarmxaw
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/snappy-1.1.10-j7x2zk63lmbm36rc724j3ik66antzv5k
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/yaml-cpp-0.7.0-uzxatkd4mofdtoybimjtqqxkpeodazv2
==> Installing cgns-4.4.0-p4ev6stiawmstyzelxxbdhlqa4fntbni [24/34]
==> No binary for cgns-4.4.0-p4ev6stiawmstyzelxxbdhlqa4fntbni found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/cache/_source-cache/archive/3b/3b0615d1e6b566aa8772616ba5fd9ca4eca1a600720e36eadd914be348925fe2.tar.gz
==> No patches needed for cgns
==> cgns: Executing phase: 'cmake'
==> cgns: Executing phase: 'build'
==> cgns: Executing phase: 'install'
==> cgns: Successfully installed cgns-4.4.0-p4ev6stiawmstyzelxxbdhlqa4fntbni
Stage: 24.65s. Cmake: 54.14s. Build: 3m 36.25s. Install: 9.74s. Post-install: 2.39s. Total: 5m 10.68s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/cgns-4.4.0-p4ev6stiawmstyzelxxbdhlqa4fntbni
==> Installing matio-1.5.17-c6kwsg44u2fvcg2yugr2abtnvivfyrle [25/34]
==> No binary for matio-1.5.17-c6kwsg44u2fvcg2yugr2abtnvivfyrle found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/cache/_source-cache/archive/5e/5e455527d370ab297c4abe5a2ab4d599c93ac7c1a0c85d841cc5c22f8221c400.tar.gz
==> Ran patch() for matio
==> matio: Executing phase: 'autoreconf'
==> matio: Executing phase: 'configure'
==> matio: Executing phase: 'build'
==> matio: Executing phase: 'install'
==> matio: Successfully installed matio-1.5.17-c6kwsg44u2fvcg2yugr2abtnvivfyrle
Stage: 28.39s. Autoreconf: 1.78s. Configure: 2m 14.74s. Build: 3m 26.96s. Install: 10.71s. Post-install: 6.06s. Total: 6m 32.90s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/matio-1.5.17-c6kwsg44u2fvcg2yugr2abtnvivfyrle
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/parmetis-4.0.3-jmlixfu3hqiz25yonvr44upgfp7aj3bt
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/c-blosc-1.21.5-66ynsnfbl2evrc6id523jcamtzvu2ugx
==> Installing openfast-3.4.1-vhwiq5fnwl67p33ec5duakym2oocxdri [28/34]
==> No binary for openfast-3.4.1-vhwiq5fnwl67p33ec5duakym2oocxdri found: installing from source
==> No patches needed for openfast
==> openfast: Executing phase: 'cmake'
==> Error: ProcessError: Command exited with status 1:
'/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/cmake-3.27.7-ussgjuqkqbxi5dcv7kbp6bugdcjc5ph6/bin/cmake' '-G' 'Unix Makefiles' '-DCMAKE_INSTALL_PREFIX:STRING=/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/openfast-3.4.1-vhwiq5fnwl67p33ec5duakym2oocxdri' '-DCMAKE_BUILD_TYPE:STRING=Release' '-DCMAKE_INTERPROCEDURAL_OPTIMIZATION:BOOL=OFF' '-DCMAKE_VERBOSE_MAKEFILE:BOOL=ON' '-DCMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=ON' '-DCMAKE_INSTALL_RPATH:STRING=/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/openfast-3.4.1-vhwiq5fnwl67p33ec5duakym2oocxdri/lib;/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/openfast-3.4.1-vhwiq5fnwl67p33ec5duakym2oocxdri/lib64;/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/hdf5-1.14.3-46bpm4dbjw4wlfxjwd56aweppb6bzneo/lib;/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3/lib;/opt/FJSVxtclanga/tcsds-mpi-latest/lib64;/opt/FJSVxtclanga/tcsds-ssl2-latest/lib64;/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/yaml-cpp-0.7.0-uzxatkd4mofdtoybimjtqqxkpeodazv2/lib64' '-DCMAKE_PREFIX_PATH:STRING=/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/yaml-cpp-0.7.0-uzxatkd4mofdtoybimjtqqxkpeodazv2;/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/hdf5-1.14.3-46bpm4dbjw4wlfxjwd56aweppb6bzneo;/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/cmake-3.27.7-ussgjuqkqbxi5dcv7kbp6bugdcjc5ph6;/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3;/opt/FJSVxtclanga/tcsds-ssl2-latest;/opt/FJSVxtclanga/tcsds-mpi-latest' '-DBUILD_DOCUMENTATION:BOOL=OFF' '-DBUILD_TESTING:BOOL=OFF' '-DBUILD_SHARED_LIBS:BOOL=ON' '-DDOUBLE_PRECISION:BOOL=ON' '-DUSE_DLL_INTERFACE:BOOL=ON' '-DBUILD_OPENFAST_CPP_API:BOOL=ON' '-DCMAKE_POSITION_INDEPENDENT_CODE:BOOL=ON' '-DBLAS_LIBRARIES:STRING=/opt/FJSVxtclanga/tcsds-ssl2-latest/lib64/libfjlapackexsve.so;/opt/FJSVxtclanga/tcsds-ssl2-latest/lib64/libfjomphk.so;/opt/FJSVxtclanga/tcsds-ssl2-latest/lib64/libfjomp.so;/opt/FJSVxtclanga/tcsds-ssl2-latest/lib64/libssl2mtexsve.a;/opt/FJSVxtclanga/tcsds-ssl2-latest/lib64/libssl2mtsve.a;/opt/FJSVxtclanga/tcsds-ssl2-latest/lib64/libfj90i.so;/opt/FJSVxtclanga/tcsds-ssl2-latest/lib64/libfj90fmt_sve.a;/opt/FJSVxtclanga/tcsds-ssl2-latest/lib64/libfj90f.so;/opt/FJSVxtclanga/tcsds-ssl2-latest/lib64/libfjsrcinfo.so;/opt/FJSVxtclanga/tcsds-ssl2-latest/lib64/libfj90rt.so' '-DLAPACK_LIBRARIES:STRING=/opt/FJSVxtclanga/tcsds-ssl2-latest/lib64/libfjlapackexsve.so;/opt/FJSVxtclanga/tcsds-ssl2-latest/lib64/libfjomphk.so;/opt/FJSVxtclanga/tcsds-ssl2-latest/lib64/libfjomp.so;/opt/FJSVxtclanga/tcsds-ssl2-latest/lib64/libssl2mtexsve.a;/opt/FJSVxtclanga/tcsds-ssl2-latest/lib64/libssl2mtsve.a;/opt/FJSVxtclanga/tcsds-ssl2-latest/lib64/libfj90i.so;/opt/FJSVxtclanga/tcsds-ssl2-latest/lib64/libfj90fmt_sve.a;/opt/FJSVxtclanga/tcsds-ssl2-latest/lib64/libfj90f.so;/opt/FJSVxtclanga/tcsds-ssl2-latest/lib64/libfjsrcinfo.so;/opt/FJSVxtclanga/tcsds-ssl2-latest/lib64/libfj90rt.so' '-DCMAKE_CXX_COMPILER:STRING=/opt/FJSVxtclanga/tcsds-mpi-latest/bin/mpiFCC' '-DCMAKE_C_COMPILER:STRING=/opt/FJSVxtclanga/tcsds-mpi-latest/bin/mpifcc' '-DCMAKE_Fortran_COMPILER:STRING=/opt/FJSVxtclanga/tcsds-mpi-latest/bin/mpifrt' '-DMPI_CXX_COMPILER:STRING=/opt/FJSVxtclanga/tcsds-mpi-latest/bin/mpiFCC' '-DMPI_C_COMPILER:STRING=/opt/FJSVxtclanga/tcsds-mpi-latest/bin/mpifcc' '-DMPI_Fortran_COMPILER:STRING=/opt/FJSVxtclanga/tcsds-mpi-latest/bin/mpifrt' '-DHDF5_ROOT:STRING=/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/hdf5-1.14.3-46bpm4dbjw4wlfxjwd56aweppb6bzneo' '-DYAML_ROOT:STRING=/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/yaml-cpp-0.7.0-uzxatkd4mofdtoybimjtqqxkpeodazv2' '-DHDF5_NO_FIND_PACKAGE_CONFIG_FILE:BOOL=ON' '/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-openfast-3.4.1-vhwiq5fnwl67p33ec5duakym2oocxdri/spack-src'

1 error found in build log:
25 -- Check for working C compiler: /opt/FJSVxtclanga/tcsds-mpi-latest/
bin/mpifcc - skipped
26 -- Detecting C compile features
27 -- Detecting C compile features - done
28 -- Detecting Fortran compiler ABI info
29 -- Detecting Fortran compiler ABI info - done
30 -- Check for working Fortran compiler: /opt/FJSVxtclanga/tcsds-mpi-l
atest/bin/mpifrt - skipped
>> 31 CMake Error at cmake/OpenfastFortranOptions.cmake:46 (message):
32 OpenFAST requires either GFortran or Intel Fortran Compiler. Comp
iler
33 detected by CMake: mpifrt.
34 Call Stack (most recent call first):
35 CMakeLists.txt:68 (set_fast_fortran)
36
37

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-openfast-3.4.1-vhwiq5fnwl67p33ec5duakym2oocxdri/spack-build-out.txt

==> Warning: Skipping build of amr-wind-main-dqcw2bh4xv4lkyla2gk4bqao4srd53ci since openfast-3.4.1-vhwiq5fnwl67p33ec5duakym2oocxdri failed
==> Warning: Skipping build of exawind-master-ephf37uxrnbg6z533db7xwnxfj65dgvy since amr-wind-main-dqcw2bh4xv4lkyla2gk4bqao4srd53ci failed
==> Warning: Skipping build of nalu-wind-master-itr2zwikoqvr32rbuvvafawr2dlsng2f since openfast-3.4.1-vhwiq5fnwl67p33ec5duakym2oocxdri failed
==> Installing netcdf-c-4.9.2-cde6iw6jywqhphnnpg3jzghkycyugwqp [29/34]
==> No binary for netcdf-c-4.9.2-cde6iw6jywqhphnnpg3jzghkycyugwqp found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/cache/_source-cache/archive/bc/bc104d101278c68b303359b3dc4192f81592ae8640f1aee486921138f7f88cb7.tar.gz
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/cache/_source-cache/archive/01/0161eb870fdfaf61be9d70132c9447a537320342366362e76b8460c823bf95ca
==> Applied patch https://github.com/Unidata/netcdf-c/commit/f8904d5a1d89420dde0f9d2c0e051ba08d08e086.patch?full_index=1
==> netcdf-c: Executing phase: 'autoreconf'
==> netcdf-c: Executing phase: 'configure'
==> netcdf-c: Executing phase: 'build'
==> netcdf-c: Executing phase: 'install'
==> netcdf-c: Successfully installed netcdf-c-4.9.2-cde6iw6jywqhphnnpg3jzghkycyugwqp
Stage: 2m 29.73s. Autoreconf: 0.01s. Configure: 11m 21.12s. Build: 7m 36.02s. Install: 38.07s. Post-install: 8.73s. Total: 22m 19.60s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/netcdf-c-4.9.2-cde6iw6jywqhphnnpg3jzghkycyugwqp
==> Installing nccmp-1.9.1.0-idurn6i4tg7ftugtxbwhws3lsqb7odub [30/34]
==> No binary for nccmp-1.9.1.0-idurn6i4tg7ftugtxbwhws3lsqb7odub found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/5a/5aa8d6cbc54d26f77e3d0511690cfafa57514a4145f75e8cabce782126509c91.tar.gz
==> No patches needed for nccmp
==> nccmp: Executing phase: 'cmake'
==> nccmp: Executing phase: 'build'
==> nccmp: Executing phase: 'install'
==> nccmp: Successfully installed nccmp-1.9.1.0-idurn6i4tg7ftugtxbwhws3lsqb7odub
Stage: 20.30s. Cmake: 6m 58.55s. Build: 4m 49.56s. Install: 18.22s. Post-install: 5.25s. Total: 12m 38.53s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/nccmp-1.9.1.0-idurn6i4tg7ftugtxbwhws3lsqb7odub
==> Installing trilinos-13.4.1-txaytnrddpf5wkr3py4kcxvrbz2z37tw [31/34]
==> No binary for trilinos-13.4.1-txaytnrddpf5wkr3py4kcxvrbz2z37tw found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/cache/_source-cache/archive/54/5465cbff3de7ef4ac7d40eeff9d99342c00d9d20eee0a5f64f0a523093f5f1b3.tar.gz
==> No patches needed for trilinos
==> trilinos: Executing phase: 'cmake'
==> trilinos: Executing phase: 'build'
==> trilinos: Executing phase: 'install'
==> trilinos: Successfully installed trilinos-13.4.1-txaytnrddpf5wkr3py4kcxvrbz2z37tw
Stage: 50m 29.01s. Cmake: 12m 51.92s. Build: 2h 44m 32.71s. Install: 9m 34.83s. Post-install: 3m 46.30s. Total: 4h 1m 56.28s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/trilinos-13.4.1-txaytnrddpf5wkr3py4kcxvrbz2z37tw
==> Error: exawind-master-ephf37uxrnbg6z533db7xwnxfj65dgvy: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).


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