List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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fpocket 4.1

Compiler Fujitsu Compiler Fujitsu C/C++ Compiler 4.10.0 tcsds-1.2.38
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
==> Warning: config:terminal_title has been replaced by install_status and is ignored
==> Warning: Failed to initialize repository: '$spack/var/spack/repos/local'.
No repo.yaml found in '$spack/var/spack/repos/local'
To remove the bad repository, run this command:
spack repo rm $spack/var/spack/repos/local
[+] /usr (external gmake-4.2.1-eszqmok6vi6wxcmklx6bqloeidbh25kb)
[+] /usr (external bzip2-1.0.6-r4iabrte3nd5eemcd5v5coc3kvsnoyzu)
[+] /usr (external lz4-1.8.3-ldbpdr7ujm6p5vdasnwd2ujsioqi34gf)
[+] /opt/FJSVxtclanga/tcsds-mpi-latest (external fujitsu-mpi-head-3njd5uwuazr4j2no6fqh4cpjmezknh3z)
[+] /usr (external pkgconf-1.4.2-mmjuloqcob6vnd6bylwgum67waaa3kht)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/snappy-1.1.10-j7x2zk63lmbm36rc724j3ik66antzv5k
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zstd-1.5.5-o7dcxyae4kjgruht44yuloa27ddisxfe
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libaec-1.0.6-5mds5a4x6u7m2ysxqxxgm2l6tpax77ds
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/hdf5-1.14.3-qxnacxgse3udxh7b6wscu6iz3vsyvu6a
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/c-blosc-1.21.5-66ynsnfbl2evrc6id523jcamtzvu2ugx
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/netcdf-c-4.9.2-gnv35ekwuowxz4iyaik777xaxvno4pvm
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/netcdf-cxx-4.2-rdljk6mns73rq66krhzeb6jujoaboqe3
==> Installing fpocket-4.1-pedmczqhmuzk6pa4ckkhtu23zkckztei [14/14]
==> No binary for fpocket-4.1-pedmczqhmuzk6pa4ckkhtu23zkckztei found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/1a/1a2af2d3f2df42de67301996db3b93c7eaff0375f866443c0468dcf4b1750688.tar.gz
==> No patches needed for fpocket
==> fpocket: Executing phase: 'edit'
==> fpocket: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16'

5 errors found in build log:
5 ==> [2024-03-17-10:09:00.953662] 'make' '-j16'
6 cd src/qhull/ && make
7 clang -W -Wextra -Wwrite-strings -Wstrict-prototypes -DM_OS_LINUX -D
MNO_MEM_DEBUG -O2 -g -pg -std=c99 -Iplugins/include -Iplugins/LINUXA
MD64/molfile -c src/fpmain.c -o obj/fpmain.o
8 make[1]: warning: jobserver unavailable: using -j1. Add '+' to pare
nt make rule.
9 make[1]: Entering directory '/vol0003/rccs-sdt/data/a01008/tmpdir/sp
ack-stage/spack-stage-fpocket-4.1-pedmczqhmuzk6pa4ckkhtu23zkckztei/s
pack-src/src/qhull'
10 mkdir -p bin lib
>> 11 make: execvp: clang: Permission denied
>> 12 make: *** [makefile:148: obj/fpmain.o] Error 127
13 make: *** Waiting for unfinished jobs....
14 clang -c -O3 -ansi -Isrc -fpic -Wall -Wcast-qual -Wextra -Wwrite-str
ings -Wshadow -o src/rbox/rbox.o src/rbox/rbox.c
>> 15 make[1]: execvp: clang: Permission denied
>> 16 make[1]: *** [Makefile:529: src/rbox/rbox.o] Error 127
17 make[1]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/spa
ck-stage/spack-stage-fpocket-4.1-pedmczqhmuzk6pa4ckkhtu23zkckztei/sp
ack-src/src/qhull'
>> 18 make: *** [makefile:163: qhull] Error 2

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-fpocket-4.1-pedmczqhmuzk6pa4ckkhtu23zkckztei/spack-build-out.txt


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