List of Open Source Software which can be built on Fugaku
 |
Spack will be used to manage open source software packages on Fugaku.
Fugaku users can easily use pre-installed packages and built packages based on Spack recipes.
The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes.
Note that the results in this list do not guarantee that each package will work properly.
On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
|
gmt 6.4.0
| Compiler | Fujitsu Compiler Fujitsu C/C++ Compiler 4.10.0 tcsds-1.2.38 |
|---|---|
| Result | Dependency Error |
Failed Reason
Failed to install dependency package :
------------------------------------------------
1640 Segments would overlap.
>> 1641 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__mpc_dvtalc'
>> 1642 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_atan2'
>> 1643 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `omp_get_num_threads_'
>> 1644 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__f_scmov'
>> 1645 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__jwe_xdal'
>> 1646 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__f_ltm4'
>> 1647 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `omp_get_thread_num_'
>> 1648 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_log10'
>> 1649 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__f_aixi'
>> 1650 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__jwe_xstp'
>> 1651 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__jwe_xalc'
>> 1652 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__jwe_obar'
>> 1653 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_datan2'
>> 1654 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `clock_'
>> 1655 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_dlog'
>> 1656 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_adxi'
>> 1657 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_cexp'
>> 1658 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_acxi'
>> 1659 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__f_ccomp'
>> 1660 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_axxi'
>> 1661 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__jwe_oinf'
>> 1662 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_arxr'
>> 1663 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_dlog10'
>> 1664 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__f_trans'
>> 1665 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_arxi'
>> 1666 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_adxd'
>> 1667 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__jwe_isfm'
>> 1668 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_csqrt'
>> 1669 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_dexp'
>> 1670 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `omp_get_max_threads_'
>> 1671 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__mpc_dvtdal'
>> 1672 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_dcos'
>> 1673 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_cdexp'
>> 1674 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_cdsqrt'
>> 1675 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_sin'
>> 1676 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_dscn2'
>> 1677 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_log'
>> 1678 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__jwe_opar'
>> 1679 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_scns2'
>> 1680 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__jwe_ilst'
>> 1681 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_exp'
>> 1682 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `jwe_ptnm_'
>> 1683 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__f_conjg'
>> 1684 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_dsin'
>> 1685 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__jwe_ofls'
>> 1686 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__f_dconjg'
>> 1687 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__jwe_xset_sccr'
>> 1688 /opt/FJSVxtclanga/tcsds-1.2.38/clang-comp/bin/../../lib64/libfjlap
ack.so: undefined reference to `__g_cos'
>> 1689 clang-7: error: linker command failed with exit code 1 (use -v to
see invocation)
1690 [182/218] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-2024022
7/spack/lib/spack/env/fj/fcc -DLIBRARY_EXPORTS -I/vol0003/rccs-sdt
/data/a01008/tmpdir/spack-stage/spack-stage-gmt-6.4.0-qi3btmyg7lez
jdmbadjxsjdbxdfcsmyg/spack-build-qi3btmy/src -I/data/rccs-sdt/a010
08/tmpdir/spack-stage/spack-stage-gmt-6.4.0-qi3btmyg7lezjdmbadjxsj
dbxdfcsmyg/spack-src/src -I/vol0003/rccs-sdt/data/a01008/spack-all
-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/net
cdf-c-4.9.2-gnv35ekwuowxz4iyaik777xaxvno4pvm/include -I/vol0003/rc
cs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/lin
ux-rhel8-a64fx/fj-4.10.0/gdal-3.7.3-o7ber2dnhkk5ddjmkbfnh3lvbl7gb2
xe/include -I/vol0003/rccs-sdt/data/a01008/spack-all-test/env-2024
0227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/geos-3.12.0-zejfd
tvf67bdd46tjvvy5keji6kfxpn3/include -I/vol0003/rccs-sdt/data/a0100
8/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj
-4.10.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3/include -I/
vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-gmt-6.
4.0-qi3btmyg7lezjdmbadjxsjdbxdfcsmyg/spack-build-qi3btmy/src/geode
sy -I/vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-
gmt-6.4.0-qi3btmyg7lezjdmbadjxsjdbxdfcsmyg/spack-build-qi3btmy/src
/gshhg -I/vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-st
age-gmt-6.4.0-qi3btmyg7lezjdmbadjxsjdbxdfcsmyg/spack-build-qi3btmy
/src/img -I/vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-
stage-gmt-6.4.0-qi3btmyg7lezjdmbadjxsjdbxdfcsmyg/spack-build-qi3bt
my/src/mgd77 -I/vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/sp
ack-stage-gmt-6.4.0-qi3btmyg7lezjdmbadjxsjdbxdfcsmyg/spack-build-q
i3btmy/src/potential -I/vol0003/rccs-sdt/data/a01008/tmpdir/spack-
stage/spack-stage-gmt-6.4.0-qi3btmyg7lezjdmbadjxsjdbxdfcsmyg/spack
-build-qi3btmy/src/segy -I/vol0003/rccs-sdt/data/a01008/tmpdir/spa
ck-stage/spack-stage-gmt-6.4.0-qi3btmyg7lezjdmbadjxsjdbxdfcsmyg/sp
ack-build-qi3btmy/src/seis -I/vol0003/rccs-sdt/data/a01008/tmpdir/
spack-stage/spack-stage-gmt-6.4.0-qi3btmyg7lezjdmbadjxsjdbxdfcsmyg
/spack-build-qi3btmy/src/spotter -I/vol0003/rccs-sdt/data/a01008/t
mpdir/spack-stage/spack-stage-gmt-6.4.0-qi3btmyg7lezjdmbadjxsjdbxd
fcsmyg/spack-build-qi3btmy/src/x2sys -std=gnu99 -O3 -DNDEBUG -fPI
C -MD -MT src/CMakeFiles/supplements.dir/potential/talwani3d.c.o -
MF src/CMakeFiles/supplements.dir/potential/talwani3d.c.o.d -o src
/CMakeFiles/supplements.dir/potential/talwani3d.c.o -c /data/rccs-
sdt/a01008/tmpdir/spack-stage/spack-stage-gmt-6.4.0-qi3btmyg7lezjd
mbadjxsjdbxdfcsmyg/spack-src/src/potential/talwani3d.c
1691 [WARN] xos LPG 2003 - Failed to map HugeTLBfs for data/bss: Layout
problem with segments 0 and 1:
1692 Segments would overlap.
1693 [WARN] xos LPG 2003 - Failed to map HugeTLBfs for data/bss: Layout
problem with segments 0 and 1:
1694 Segments would overlap.
1695 [WARN] xos LPG 2003 - Failed to map HugeTLBfs for data/bss: Layout
problem with segments 0 and 1:
See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-gmt-6.4.0-qi3btmyg7lezjdmbadjxsjdbxdfcsmyg/spack-build-out.txt
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