Spack will be used to manage open source software packages on Fugaku.
Fugaku users can easily use pre-installed packages and built packages based on Spack recipes.
The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes.
Note that the results in this list do not guarantee that each package will work properly.
On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
|
Compiler | Fujitsu Compiler Fujitsu C/C++ Compiler 4.10.0 tcsds-1.2.38 |
---|---|
Result | Dependency Error |
Failed to install dependency package :
------------------------------------------------
==> Warning: config:terminal_title has been replaced by install_status and is ignored
==> Warning: Failed to initialize repository: '$spack/var/spack/repos/local'.
No repo.yaml found in '$spack/var/spack/repos/local'
To remove the bad repository, run this command:
spack repo rm $spack/var/spack/repos/local
[+] /opt/FJSVxtclanga/tcsds-mpi-latest (external fujitsu-mpi-head-3njd5uwuazr4j2no6fqh4cpjmezknh3z)
[+] /usr (external gmake-4.2.1-eszqmok6vi6wxcmklx6bqloeidbh25kb)
[+] /usr (external pkgconf-1.4.2-mmjuloqcob6vnd6bylwgum67waaa3kht)
[+] /usr (external curl-7.61.1-qsvgylcys5hkzdnl2pdh4blrprxlsp5m)
[+] /usr (external ncurses-6.1-a6lc7oq2dlgphtibbpp6x72mqgmscros)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/hdf5-1.14.3-mqkswcp3rpm72ashhz365uun53wlr4mt
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/cmake-3.27.7-ussgjuqkqbxi5dcv7kbp6bugdcjc5ph6
==> Installing zfp-1.0.0-ry3mq64q5jjr7v6yytuxx6z66xersnbn [9/10]
==> No binary for zfp-1.0.0-ry3mq64q5jjr7v6yytuxx6z66xersnbn found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/0e/0ea08ae3e50e3c92f8b8cf41ba5b6e2de8892bc4a4ca0c59b8945b6c2ab617c4.tar.gz
==> No patches needed for zfp
==> zfp: Executing phase: 'cmake'
==> zfp: Executing phase: 'build'
==> zfp: Executing phase: 'install'
==> zfp: Successfully installed zfp-1.0.0-ry3mq64q5jjr7v6yytuxx6z66xersnbn
Stage: 9.23s. Cmake: 12.04s. Build: 40.16s. Install: 5.57s. Post-install: 1.55s. Total: 1m 9.95s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zfp-1.0.0-ry3mq64q5jjr7v6yytuxx6z66xersnbn
==> Installing h5z-zfp-1.1.1-tbwfd246k4s7pinvjgyjelzqefgkuxq4 [10/10]
==> No binary for h5z-zfp-1.1.1-tbwfd246k4s7pinvjgyjelzqefgkuxq4 found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/92/921af7b9d1c8c46c036b46544f2785f69d405c0701abe1c1ce3aca2bd5899171.tar.gz
==> Applied patch /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/repos/builtin/packages/h5z-zfp/fj.patch
==> h5z-zfp: Executing phase: 'edit'
==> h5z-zfp: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16' 'PREFIX=/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/h5z-zfp-1.1.1-tbwfd246k4s7pinvjgyjelzqefgkuxq4' 'CC=/opt/FJSVxtclanga/tcsds-mpi-latest/bin/mpifcc' 'HDF5_HOME=/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/hdf5-1.14.3-mqkswcp3rpm72ashhz365uun53wlr4mt' 'ZFP_HOME=/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zfp-1.0.0-ry3mq64q5jjr7v6yytuxx6z66xersnbn' 'FC=/opt/FJSVxtclanga/tcsds-mpi-latest/bin/mpifrt' 'all'
7 errors found in build log:
14 mkdir plugin
15 /opt/FJSVxtclanga/tcsds-mpi-latest/bin/mpifcc H5Zzfp_plugin.o -dynam
iclib -o plugin/libh5zzfp.dylib \
16 -Wl,-rpath,/vol0003/rccs-sdt/data/a01008/spack-all-test/env-2024
0227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/hdf5-1.14.3-mqkswcp
3rpm72ashhz365uun53wlr4mt/lib -Wl,-rpath,/vol0003/rccs-sdt/data/a010
08/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-
4.10.0/zfp-1.0.0-ry3mq64q5jjr7v6yytuxx6z66xersnbn/lib64 \
17 -L/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spac
k/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zfp-1.0.0-ry3mq64q5jjr7v6yyt
uxx6z66xersnbn/lib64 -L/vol0003/rccs-sdt/data/a01008/spack-all-test/
env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/hdf5-1.14.3
-mqkswcp3rpm72ashhz365uun53wlr4mt/lib -lhdf5 -lzfp
18 clang-7: warning: argument unused during compilation: '-dynamiclib'
[-Wunused-command-line-argument]
19 /usr/lib/gcc/aarch64-redhat-linux/8/../../../../lib64/crt1.o: In fun
ction `_start':
>> 20 (.text+0x18): undefined reference to `main'
>> 21 (.text+0x1c): undefined reference to `main'
>> 22 (.text+0x20): undefined reference to `main'
>> 23 (.text+0x24): undefined reference to `main'
>> 24 clang-7: error: linker command failed with exit code 1 (use -v to se
e invocation)
>> 25 make[1]: *** [Makefile:19: plugin/libh5zzfp.dylib] Error 1
26 make[1]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/spa
ck-stage/spack-stage-h5z-zfp-1.1.1-tbwfd246k4s7pinvjgyjelzqefgkuxq4/
spack-src/src'
>> 27 make: *** [Makefile:44: all] Error 2
See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-h5z-zfp-1.1.1-tbwfd246k4s7pinvjgyjelzqefgkuxq4/spack-build-out.txt