List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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herwigpp 2.7.1

Compiler Fujitsu Compiler Fujitsu C/C++ Compiler 4.10.0 tcsds-1.2.38
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
==> Warning: config:terminal_title has been replaced by install_status and is ignored
==> Warning: Failed to initialize repository: '$spack/var/spack/repos/local'.
No repo.yaml found in '$spack/var/spack/repos/local'
To remove the bad repository, run this command:
spack repo rm $spack/var/spack/repos/local
[+] /usr (external bzip2-1.0.6-r4iabrte3nd5eemcd5v5coc3kvsnoyzu)
[+] /usr (external xz-5.2.4-l5cq5xund4a2b3ikazvehpmbiao6srbv)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zstd-1.5.5-o7dcxyae4kjgruht44yuloa27ddisxfe
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/fastjet-3.4.1-t7jh77hw5cktpmvonj2pilkhpadliwqy
[+] /usr (external gmake-4.2.1-eszqmok6vi6wxcmklx6bqloeidbh25kb)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/gnuconfig-2022-09-17-w33oejhx46ex2iql4orzjqdmt2kdqdb2
[+] /usr (external autoconf-2.69-titfazaulrbnqxmahzxzof53lmsnabip)
[+] /usr (external automake-1.16.1-fryterkxezzfuo7itm4kijqfnazo5uk4)
[+] /usr (external gettext-0.19.8.1-6jl23wn6jpwquhvqibpwhvia7vxsgrq3)
[+] /usr (external libtool-2.4.6-c63win5txkc7eap5ppbbjjoaqyj5i6wx)
[+] /usr (external m4-1.4.18-craoyd3hmfdcanz7zxglna5yxcvdtoem)
[+] /vol0004/apps/oss/spack-v0.19/opt/spack/linux-rhel8-a64fx/fj-4.8.1/python-3.10.8-7q66snjvhvy7im57hncbgpirmddrb5sk (external python-3.10.8-zcbuy6dnhwhmsrco46b6ayaywy4nrfcy)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/boost-1.83.0-fpdkui6yha674j4vqmienjpxohh6fwrs
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/hepmc-2.06.11-522otaqiyaee5d72fataznavzfhgufln
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/gsl-2.7.1-6mx2lcmimqbuoeralzd5dqmp7f73t77k
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-setuptools-68.0.0-umhokgnekqyzlgjhl6pifea67uvzwnge
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-cython-3.0.4-7sdgkmtvjntri7top7bfm2hd5u7drmyc
==> Installing lhapdf-6.2.3-e2pg6okh5szjchzscrscopg4o2mymjac [19/21]
==> No binary for lhapdf-6.2.3-e2pg6okh5szjchzscrscopg4o2mymjac found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/37/37200a1ab70247250a141dfed7419d178f9a83bd23a4f8a38e203d4e27b41308.tar.gz
==> No patches needed for lhapdf
==> lhapdf: Executing phase: 'autoreconf'
==> lhapdf: Executing phase: 'configure'
==> lhapdf: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16' 'V=1'

13 errors found in build log:
19 libtoolize: copying file 'm4/ltsugar.m4'
20 libtoolize: copying file 'm4/ltversion.m4'
21 libtoolize: copying file 'm4/lt~obsolete.m4'
22 autoreconf: running: /usr/bin/autoconf --force
23 autoreconf: running: /usr/bin/autoheader --force
24 autoreconf: running: automake --add-missing --copy --force-missing
>> 25 configure.ac:77: installing 'config/compile'
>> 26 configure.ac:80: installing 'config/config.guess'
>> 27 configure.ac:80: installing 'config/config.sub'
>> 28 configure.ac:10: installing 'config/install-sh'
>> 29 configure.ac:10: installing 'config/missing'
30 examples/Makefile.am: installing 'config/depcomp'
31 parallel-tests: installing 'config/test-driver'
32 autoreconf: Leaving directory `.'
33 ==> [2024-03-21-12:46:27.420927] Find (recursive): /data/rccs-sdt/a
01008/tmpdir/spack-stage/spack-stage-lhapdf-6.2.3-e2pg6okh5szjchzsc
rscopg4o2mymjac ['config.sub', 'config.guess']
34 ==> [2024-03-21-12:46:27.596795] Find complete: /data/rccs-sdt/a010
08/tmpdir/spack-stage/spack-stage-lhapdf-6.2.3-e2pg6okh5szjchzscrsc
opg4o2mymjac ['config.sub', 'config.guess']
35 ==> lhapdf: Executing phase: 'configure'

...

135 checking how to hardcode library paths into programs... immediate
136 configure: Building LHAGLUE Fortran wrappers
137 configure: Building LHAGLUE C++ wrappers
138 checking for pdflatex... no
139 checking for doxygen... no
140 checking for python... /vol0004/apps/oss/spack-v0.19/opt/spack/linu
x-rhel8-a64fx/fj-4.8.1/python-3.10.8-7q66snjvhvy7im57hncbgpirmddrb5
sk/bin/python
>> 141 <string>:1: DeprecationWarning: The distutils package is deprecated
and slated for removal in Python 3.12. Use setuptools or check PEP
632 for potential alternatives
>> 142 <string>:1: DeprecationWarning: The distutils.sysconfig module is d
eprecated, use sysconfig instead
143 checking for python version... 3.1
144 checking for python platform... linux
145 checking for python script directory... ${prefix}/lib/python3.10/si
te-packages
146 checking for python extension module directory... ${exec_prefix}/li
b/python3.10/site-packages
147 checking for Cython >= 0.19... yes
148 configure: Cython >= 0.19 found: Python extension source can be reb
uilt (for developers)

...

452 make[1]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/sp
ack-stage/spack-stage-lhapdf-6.2.3-e2pg6okh5szjchzscrscopg4o2mymjac
/spack-src/include'
453 Making all in wrappers
454 make[1]: Entering directory '/vol0003/rccs-sdt/data/a01008/tmpdir/s
pack-stage/spack-stage-lhapdf-6.2.3-e2pg6okh5szjchzscrscopg4o2mymja
c/spack-src/wrappers'
455 Making all in python
456 make[2]: Entering directory '/vol0003/rccs-sdt/data/a01008/tmpdir/s
pack-stage/spack-stage-lhapdf-6.2.3-e2pg6okh5szjchzscrscopg4o2mymja
c/spack-src/wrappers/python'
457 cython lhapdf.pyx --cplus
>> 458 /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt
/spack/linux-rhel8-a64fx/fj-4.10.0/py-cython-3.0.4-7sdgkmtvjntri7to
p7bfm2hd5u7drmyc/lib/python3.10/site-packages/Cython/Compiler/Main.
py:381: FutureWarning: Cython directive 'language_level' not set, u
sing '3str' for now (Py3). This has changed from earlier releases!
File: /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-
lhapdf-6.2.3-e2pg6okh5szjchzscrscopg4o2mymjac/spack-src/wrappers/py
thon/lhapdf.pyx
459 tree = Parsing.p_module(s, pxd, full_module_name)
460
>> 461 Error compiling Cython file:
462 ------------------------------------------------------------
463 ...
464 if scheme == "VARIABLE":
465 s = VARIABLE
466 elif scheme == "FIXED":
467 s = FIXED
468 else:
469 print "You can only set the flavor scheme to FIXED or VA
RIABLE"
470 ^
471 ------------------------------------------------------------
472
>> 473 lhapdf.pyx:525:17: Syntax error in simple statement list
>> 474 make[2]: *** [Makefile:473: lhapdf.cpp] Error 1
475 make[2]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/sp
ack-stage/spack-stage-lhapdf-6.2.3-e2pg6okh5szjchzscrscopg4o2mymjac
/spack-src/wrappers/python'
>> 476 make[1]: *** [Makefile:375: all-recursive] Error 1
477 make[1]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/sp
ack-stage/spack-stage-lhapdf-6.2.3-e2pg6okh5szjchzscrscopg4o2mymjac
/spack-src/wrappers'
>> 478 make: *** [Makefile:508: all-recursive] Error 1

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-lhapdf-6.2.3-e2pg6okh5szjchzscrscopg4o2mymjac/spack-build-out.txt

==> Warning: Skipping build of thepeg-1.9.2-3ltwdu3qx6ctnulp2mcw6pwo35zennjh since lhapdf-6.2.3-e2pg6okh5szjchzscrscopg4o2mymjac failed
==> Warning: Skipping build of herwigpp-2.7.1-xjyyfieugyjd7jhuc6g4yfwkvzc2mwfj since thepeg-1.9.2-3ltwdu3qx6ctnulp2mcw6pwo35zennjh failed
==> Error: herwigpp-2.7.1-xjyyfieugyjd7jhuc6g4yfwkvzc2mwfj: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).


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