List of Open Source Software which can be built on Fugaku
 |
Spack will be used to manage open source software packages on Fugaku.
Fugaku users can easily use pre-installed packages and built packages based on Spack recipes.
The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes.
Note that the results in this list do not guarantee that each package will work properly.
On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
|
hisea 2017.12.26
| Compiler | Fujitsu Compiler Fujitsu C/C++ Compiler 4.10.0 tcsds-1.2.38 |
|---|---|
| Result | Dependency Error |
Failed Reason
Failed to install dependency package :
------------------------------------------------
==> Warning: config:terminal_title has been replaced by install_status and is ignored
==> Warning: Failed to initialize repository: '$spack/var/spack/repos/local'.
No repo.yaml found in '$spack/var/spack/repos/local'
To remove the bad repository, run this command:
spack repo rm $spack/var/spack/repos/local
[+] /usr (external bzip2-1.0.6-r4iabrte3nd5eemcd5v5coc3kvsnoyzu)
[+] /usr (external xz-5.2.4-l5cq5xund4a2b3ikazvehpmbiao6srbv)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zstd-1.5.5-o7dcxyae4kjgruht44yuloa27ddisxfe
[+] /usr (external gmake-4.2.1-eszqmok6vi6wxcmklx6bqloeidbh25kb)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/boost-1.83.0-fpdkui6yha674j4vqmienjpxohh6fwrs
==> Installing hisea-2017.12.26-6frgx5ho3u4b3wcpcmsqeq4lals5dfde [7/7]
==> No binary for hisea-2017.12.26-6frgx5ho3u4b3wcpcmsqeq4lals5dfde found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/3c/3c6ddfb8490a327cc5f9e45f64cd4312abc6ef5719661ce8892db8a20a1e9c5e.tar.gz
==> Ran patch() for hisea
==> hisea: Executing phase: 'edit'
==> hisea: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16'
3 errors found in build log:
8 /usr/bin/g++ -fopenmp -D_GLIBCXX_PARALLEL -std=c++0x -DUINT64 -flt
o -O3 -fomit-frame-pointer -IUtil -IThirdParty/gzstream -IAlgorithm
/vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-hisea
-2017.12.26-6frgx5ho3u4b3wcpcmsqeq4lals5dfde/spack-src/src/Util/Opti
ons.cpp -c -o Options.o
9 /usr/bin/g++ -fopenmp -D_GLIBCXX_PARALLEL -std=c++0x -DUINT64 -flt
o -O3 -fomit-frame-pointer -IUtil -IThirdParty/gzstream -IAlgorithm
/vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-hisea
-2017.12.26-6frgx5ho3u4b3wcpcmsqeq4lals5dfde/spack-src/src/Util/Sequ
enceReader.cpp -c -o SequenceReader.o
10 /usr/bin/g++ -fopenmp -D_GLIBCXX_PARALLEL -std=c++0x -DUINT64 -flt
o -O3 -fomit-frame-pointer -IUtil -IThirdParty/gzstream -IAlgorithm
/vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-hisea
-2017.12.26-6frgx5ho3u4b3wcpcmsqeq4lals5dfde/spack-src/src/Util/Memo
ryTracker.cpp -c -o MemoryTracker.o
11 /usr/bin/g++ -fopenmp -D_GLIBCXX_PARALLEL -std=c++0x -DUINT64 -flt
o -O3 -fomit-frame-pointer -IUtil -IThirdParty/gzstream -IAlgorithm
/vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-hisea
-2017.12.26-6frgx5ho3u4b3wcpcmsqeq4lals5dfde/spack-src/src/ThirdPart
y/gzstream/gzstream.C -c -o gzstream.o
12 /usr/bin/g++ -fopenmp -D_GLIBCXX_PARALLEL -std=c++0x -DUINT64 -flt
o -O3 -fomit-frame-pointer -IUtil -IThirdParty/gzstream -IAlgorithm
/vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-hisea
-2017.12.26-6frgx5ho3u4b3wcpcmsqeq4lals5dfde/spack-src/src/Algorithm
/KmerMap.cpp -c -o KmerMap.o
13 /usr/bin/g++ -fopenmp -D_GLIBCXX_PARALLEL -std=c++0x -DUINT64 -flt
o -O3 -fomit-frame-pointer -IUtil -IThirdParty/gzstream -IAlgorithm
/vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-hisea
-2017.12.26-6frgx5ho3u4b3wcpcmsqeq4lals5dfde/spack-src/src/Algorithm
/Alignment.cpp -c -o Alignment.o
>> 14 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-hisea-2
017.12.26-6frgx5ho3u4b3wcpcmsqeq4lals5dfde/spack-src/src/Util/Option
s.cpp:29:10: fatal error: boost/algorithm/string.hpp: No such file o
r directory
15 #include <boost/algorithm/string.hpp>
16 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
17 compilation terminated.
>> 18 make[1]: *** [Makefile:61: Options.o] Error 1
19 make[1]: *** Waiting for unfinished jobs....
20 make[1]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/spa
ck-stage/spack-stage-hisea-2017.12.26-6frgx5ho3u4b3wcpcmsqeq4lals5df
de/spack-src/src'
>> 21 make: *** [Makefile:111: build_src] Error 2
See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-hisea-2017.12.26-6frgx5ho3u4b3wcpcmsqeq4lals5dfde/spack-build-out.txt
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