List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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hpctoolkit 2023.08.1

Compiler Fujitsu Compiler Fujitsu C/C++ Compiler 4.10.0 tcsds-1.2.38
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
[+] /usr (external bzip2-1.0.6-r4iabrte3nd5eemcd5v5coc3kvsnoyzu)
[+] /usr (external curl-7.61.1-qsvgylcys5hkzdnl2pdh4blrprxlsp5m)
[+] /usr (external ncurses-6.1-a6lc7oq2dlgphtibbpp6x72mqgmscros)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3
[+] /usr (external elfutils-0.186-mnkxq2v6wgzmnquz62lbgnwkg4uiixre)
[+] /usr (external gmake-4.2.1-mdaxt5pmgdpy3p2ax2ddv5mgh5o43zrd)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/intel-tbb-2020.3-plwvhd4ocq55yj4ekcdoqutbmvbg2lrd
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libiberty-2.41-nsryzhwbk6vw753qbwa33fkm3b62xc75
[+] /usr (external gmake-4.2.1-eszqmok6vi6wxcmklx6bqloeidbh25kb)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/gnuconfig-2022-09-17-w33oejhx46ex2iql4orzjqdmt2kdqdb2
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/openjdk-11.0.20.1_1-tnugcuel3ph3a3rlqpfirhqh64m7irjl
[+] /usr (external xz-5.2.4-4qocf6uu4wcdmda5qes2iuoeyzonprwy)
[+] /usr (external autoconf-2.69-titfazaulrbnqxmahzxzof53lmsnabip)
[+] /usr (external automake-1.16.1-fryterkxezzfuo7itm4kijqfnazo5uk4)
[+] /usr (external libtool-2.4.6-c63win5txkc7eap5ppbbjjoaqyj5i6wx)
[+] /usr (external m4-1.4.18-craoyd3hmfdcanz7zxglna5yxcvdtoem)
[+] /usr (external numactl-2.0.12-a4f4qsoazgw5jwz5odr7me5tumwr3sou)
[+] /usr (external papi-5.6.0-bub27r3yzeahu2d55sggmc5x3odkimay)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/cmake-3.27.7-ussgjuqkqbxi5dcv7kbp6bugdcjc5ph6
==> Installing libmonitor-2023.03.15-4itcbsfdy2vd3ikxdggrrq5cgyawxf3m [21/28]
==> No binary for libmonitor-2023.03.15-4itcbsfdy2vd3ikxdggrrq5cgyawxf3m found: installing from source
==> No patches needed for libmonitor
==> libmonitor: Executing phase: 'autoreconf'
==> libmonitor: Executing phase: 'configure'
==> libmonitor: Executing phase: 'build'
==> libmonitor: Executing phase: 'install'
==> libmonitor: Successfully installed libmonitor-2023.03.15-4itcbsfdy2vd3ikxdggrrq5cgyawxf3m
Stage: 12.45s. Autoreconf: 1.04s. Configure: 54.74s. Build: 50.72s. Install: 1.50s. Post-install: 0.75s. Total: 2m 2.46s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libmonitor-2023.03.15-4itcbsfdy2vd3ikxdggrrq5cgyawxf3m
==> Installing xerces-c-3.2.4-c2io3qhee3bmgiuxbnxwvec5ptg5uz2w [22/28]
==> No binary for xerces-c-3.2.4-c2io3qhee3bmgiuxbnxwvec5ptg5uz2w found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/cache/_source-cache/archive/74/74aa626fc71e729ee227602870dd29a5a01cd8c9c1c7330837a51da2eb5722cc.tar.bz2
==> No patches needed for xerces-c
==> xerces-c: Executing phase: 'autoreconf'
==> xerces-c: Executing phase: 'configure'
==> xerces-c: Executing phase: 'build'
==> xerces-c: Executing phase: 'install'
==> xerces-c: Successfully installed xerces-c-3.2.4-c2io3qhee3bmgiuxbnxwvec5ptg5uz2w
Stage: 1m 18.96s. Autoreconf: 3.13s. Configure: 2m 51.72s. Build: 11m 30.57s. Install: 30.90s. Post-install: 8.32s. Total: 16m 24.81s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/xerces-c-3.2.4-c2io3qhee3bmgiuxbnxwvec5ptg5uz2w
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/hpcviewer-2023.07-ibd5l2zaaxuvdkxnqjqheypvubjaoyp5
==> Installing libunwind-1.6.2-yj7xaydszefnqnbtcwgzqoxbzfq2fkia [24/28]
==> No binary for libunwind-1.6.2-yj7xaydszefnqnbtcwgzqoxbzfq2fkia found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/cache/_source-cache/archive/4a/4a6aec666991fb45d0889c44aede8ad6eb108071c3554fcdff671f9c94794976.tar.gz
==> No patches needed for libunwind
==> libunwind: Executing phase: 'autoreconf'
==> libunwind: Executing phase: 'configure'
==> libunwind: Executing phase: 'build'
==> libunwind: Executing phase: 'install'
==> libunwind: Successfully installed libunwind-1.6.2-yj7xaydszefnqnbtcwgzqoxbzfq2fkia
Stage: 20.68s. Autoreconf: 1.37s. Configure: 2m 38.05s. Build: 3m 27.19s. Install: 12.99s. Post-install: 1.02s. Total: 6m 42.68s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libunwind-1.6.2-yj7xaydszefnqnbtcwgzqoxbzfq2fkia
==> Installing memkind-1.13.0-6ubg7bnh63gi2kqivt2w2tti5fhcadcq [25/28]
==> No binary for memkind-1.13.0-6ubg7bnh63gi2kqivt2w2tti5fhcadcq found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/3f/3f0d919b61fdd4d2ebce14e0b7dbb856e2144138778940107c13549523f3bdc0.tar.gz
==> Ran patch() for memkind
==> memkind: Executing phase: 'autoreconf'
==> memkind: Executing phase: 'configure'
==> memkind: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j1' 'V=1'

8 errors found in build log:
5 libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
6 libtoolize: copying file 'm4/libtool.m4'
7 libtoolize: copying file 'm4/ltoptions.m4'
8 libtoolize: copying file 'm4/ltsugar.m4'
9 libtoolize: copying file 'm4/ltversion.m4'
10 libtoolize: copying file 'm4/lt~obsolete.m4'
>> 11 configure.ac:18: installing './ar-lib'
>> 12 configure.ac:18: installing './compile'
>> 13 configure.ac:23: installing './config.guess'
>> 14 configure.ac:23: installing './config.sub'
>> 15 configure.ac:14: installing './install-sh'
>> 16 configure.ac:14: installing './missing'
17 Makefile.am: installing './depcomp'
18 parallel-tests: installing './test-driver'
19 ==> [2024-03-22-13:17:33.284644] Find (recursive): /data/rccs-sdt/
a01008/tmpdir/spack-stage/spack-stage-memkind-1.13.0-6ubg7bnh63gi2
kqivt2w2tti5fhcadcq ['config.sub', 'config.guess']
20 ==> [2024-03-22-13:17:34.090341] Find complete: /data/rccs-sdt/a01
008/tmpdir/spack-stage/spack-stage-memkind-1.13.0-6ubg7bnh63gi2kqi
vt2w2tti5fhcadcq ['config.sub', 'config.guess']
21 ==> memkind: Executing phase: 'configure'
22 ==> [2024-03-22-13:17:35.521313] Find (recursive): /data/rccs-sdt/
a01008/tmpdir/spack-stage/spack-stage-memkind-1.13.0-6ubg7bnh63gi2
kqivt2w2tti5fhcadcq/spack-src ['configure']

...

4656 ar crus lib/libjemalloc_pic.a src/jemalloc.pic.o src/arena.pic.o s
rc/background_thread.pic.o src/base.pic.o src/bin.pic.o src/bitmap
.pic.o src/ckh.pic.o src/ctl.pic.o src/div.pic.o src/extent.pic.o
src/extent_dss.pic.o src/extent_mmap.pic.o src/hash.pic.o src/hook
.pic.o src/large.pic.o src/log.pic.o src/malloc_io.pic.o src/mutex
.pic.o src/mutex_pool.pic.o src/nstime.pic.o src/pages.pic.o src/p
rng.pic.o src/prof.pic.o src/rtree.pic.o src/safety_check.pic.o sr
c/stats.pic.o src/sc.pic.o src/sz.pic.o src/tcache.pic.o src/test_
hooks.pic.o src/ticker.pic.o src/tsd.pic.o src/witness.pic.o src/j
emalloc_cpp.pic.o
4657 make[1]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/s
pack-stage/spack-stage-memkind-1.13.0-6ubg7bnh63gi2kqivt2w2tti5fhc
adcq/spack-src/jemalloc'
4658 depbase=`echo src/hbwmalloc.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'
`;\
4659 /bin/sh ./libtool --tag=CC --mode=compile /vol0003/rccs-sdt/dat
a/a01008/spack-all-test/env-20240227/spack/lib/spack/env/fj/fcc -D
HAVE_CONFIG_H -I. -I/data/rccs-sdt/a01008/tmpdir/spack-stage/spack
-stage-memkind-1.13.0-6ubg7bnh63gi2kqivt2w2tti5fhcadcq/spack-src
-I/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-memkind-1.1
3.0-6ubg7bnh63gi2kqivt2w2tti5fhcadcq/spack-src/include -I/data/rcc
s-sdt/a01008/tmpdir/spack-stage/spack-stage-memkind-1.13.0-6ubg7bn
h63gi2kqivt2w2tti5fhcadcq/spack-src/jemalloc/include -Itest/gtest_
fused -DMEMKIND_DEPRECATED\(x\)=x -fvisibility=hidden -Wall -D_GN
U_SOURCE -DJE_PREFIX=jemk_ -DMEMTIER_ALLOC_PREFIX=je_ -g -O2 -pthr
ead -fstack-protector -D_FORTIFY_SOURCE=2 -MT src/hbwmalloc.lo -MD
-MP -MF $depbase.Tpo -c -o src/hbwmalloc.lo src/hbwmalloc.c &&\
4660 mv -f $depbase.Tpo $depbase.Plo
4661 libtool: compile: /vol0003/rccs-sdt/data/a01008/spack-all-test/en
v-20240227/spack/lib/spack/env/fj/fcc -DHAVE_CONFIG_H -I. -I/data/
rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-memkind-1.13.0-6ubg
7bnh63gi2kqivt2w2tti5fhcadcq/spack-src -I/data/rccs-sdt/a01008/tmp
dir/spack-stage/spack-stage-memkind-1.13.0-6ubg7bnh63gi2kqivt2w2tt
i5fhcadcq/spack-src/include -I/data/rccs-sdt/a01008/tmpdir/spack-s
tage/spack-stage-memkind-1.13.0-6ubg7bnh63gi2kqivt2w2tti5fhcadcq/s
pack-src/jemalloc/include -Itest/gtest_fused "-DMEMKIND_DEPRECATED
(x)=x" -fvisibility=hidden -Wall -D_GNU_SOURCE -DJE_PREFIX=jemk_ -
DMEMTIER_ALLOC_PREFIX=je_ -g -O2 -pthread -fstack-protector -D_FOR
TIFY_SOURCE=2 -MT src/hbwmalloc.lo -MD -MP -MF src/.deps/hbwmalloc
.Tpo -c src/hbwmalloc.c -KPIC
>> 4662 clang-7: error: unknown argument: '-fstack-protector'
>> 4663 make: *** [Makefile:3271: src/hbwmalloc.lo] Error 1

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-memkind-1.13.0-6ubg7bnh63gi2kqivt2w2tti5fhcadcq/spack-build-out.txt

==> Warning: Skipping build of hpctoolkit-2023.08.1-pw3buycxzmq6sjxg3kx2drtqpnqngsrf since memkind-1.13.0-6ubg7bnh63gi2kqivt2w2tti5fhcadcq failed
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/yaml-cpp-0.7.0-uzxatkd4mofdtoybimjtqqxkpeodazv2
==> Installing dyninst-12.3.0-zzqemd2zuhyg2wce7scbjjqnh33ujfju [27/28]
==> No binary for dyninst-12.3.0-zzqemd2zuhyg2wce7scbjjqnh33ujfju found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/95/956b0378d2badb765a7e677c0b66c0b8b8cacca7631222bfe7a27b369abf7dd4.tar.gz
==> No patches needed for dyninst
==> dyninst: Executing phase: 'cmake'
==> dyninst: Executing phase: 'build'
==> dyninst: Executing phase: 'install'
==> dyninst: Successfully installed dyninst-12.3.0-zzqemd2zuhyg2wce7scbjjqnh33ujfju
Stage: 49.34s. Cmake: 3m 38.56s. Build: 17m 35.10s. Install: 1m 7.36s. Post-install: 5.63s. Total: 23m 22.92s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/gcc-12.2.0/dyninst-12.3.0-zzqemd2zuhyg2wce7scbjjqnh33ujfju
==> Error: hpctoolkit-2023.08.1-pw3buycxzmq6sjxg3kx2drtqpnqngsrf: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).


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