List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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lcio 2.20

Compiler Fujitsu Compiler Fujitsu C/C++ Compiler 4.10.0 tcsds-1.2.38
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
ee invocation)
>> 280 make[1]: *** [CMakeFiles/Makefile2:522: src/tbbmalloc_proxy/CMakeFi
les/tbbmalloc_proxy.dir/all] Error 2
281 make[1]: *** Waiting for unfinished jobs....
>> 282 make[2]: *** [test/CMakeFiles/test_malloc_pure_c.dir/build.make:101
: fujitsuclang_7.1_cxx11_64_release/test_malloc_pure_c] Error 1
283 make[2]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/sp
ack-stage/spack-stage-intel-tbb-2021.9.0-er5to27rat2j4dv4dizloxefxf
kuusww/spack-build-er5to27'
>> 284 make[1]: *** [CMakeFiles/Makefile2:4062: test/CMakeFiles/test_mallo
c_pure_c.dir/all] Error 2
285 [ 16%] Linking CXX shared library ../fujitsuclang_7.1_cxx11_64_rele
ase/lib_test_malloc_used_by_lib.so
286 cd /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-int
el-tbb-2021.9.0-er5to27rat2j4dv4dizloxefxfkuusww/spack-build-er5to2
7/test && /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227
/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/cmake-3.27.7-ussgjuqkq
bxi5dcv7kbp6bugdcjc5ph6/bin/cmake -E cmake_link_script CMakeFiles/_
test_malloc_used_by_lib.dir/link.txt --verbose=1
287 /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/lib
/spack/env/fj/case-insensitive/FCC -fPIC -O3 -DNDEBUG -shared -Wl,-
soname,lib_test_malloc_used_by_lib.so -o ../fujitsuclang_7.1_cxx11_
64_release/lib_test_malloc_used_by_lib.so CMakeFiles/_test_malloc_u
sed_by_lib.dir/tbbmalloc/test_malloc_used_by_lib.cpp.o -Wl,-rpath,
/vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-intel-
tbb-2021.9.0-er5to27rat2j4dv4dizloxefxfkuusww/spack-build-er5to27/f
ujitsuclang_7.1_cxx11_64_release ../fujitsuclang_7.1_cxx11_64_relea
se/libtbbmalloc.so.2.9
288 make[2]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/sp
ack-stage/spack-stage-intel-tbb-2021.9.0-er5to27rat2j4dv4dizloxefxf
kuusww/spack-build-er5to27'
289 [ 16%] Built target _test_malloc_used_by_lib
290 [ 16%] Linking CXX executable ../fujitsuclang_7.1_cxx11_64_release/
test_malloc_lib_unload

...

325 [ 20%] Linking CXX executable ../fujitsuclang_7.1_cxx11_64_release/
test_scalable_allocator
326 cd /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-int
el-tbb-2021.9.0-er5to27rat2j4dv4dizloxefxfkuusww/spack-build-er5to2
7/test && /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227
/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/cmake-3.27.7-ussgjuqkq
bxi5dcv7kbp6bugdcjc5ph6/bin/cmake -E cmake_link_script CMakeFiles/t
est_scalable_allocator.dir/link.txt --verbose=1
327 /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/lib
/spack/env/fj/case-insensitive/FCC -O3 -DNDEBUG CMakeFiles/test_sca
lable_allocator.dir/tbbmalloc/test_scalable_allocator.cpp.o -o ../f
ujitsuclang_7.1_cxx11_64_release/test_scalable_allocator -Wl,-rpat
h,/vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-inte
l-tbb-2021.9.0-er5to27rat2j4dv4dizloxefxfkuusww/spack-build-er5to27
/fujitsuclang_7.1_cxx11_64_release ../fujitsuclang_7.1_cxx11_64_rel
ease/libtbbmalloc.so.2.9
328 make[2]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/sp
ack-stage/spack-stage-intel-tbb-2021.9.0-er5to27rat2j4dv4dizloxefxf
kuusww/spack-build-er5to27'
329 [ 20%] Built target test_scalable_allocator
330 make[1]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/sp
ack-stage/spack-stage-intel-tbb-2021.9.0-er5to27rat2j4dv4dizloxefxf
kuusww/spack-build-er5to27'
>> 331 make: *** [Makefile:169: all] Error 2

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-intel-tbb-2021.9.0-er5to27rat2j4dv4dizloxefxfkuusww/spack-build-out.txt

==> Warning: Skipping build of root-6.28.06-zlynk2kcynq74m5ltkcfoeatst2mnq6a since intel-tbb-2021.9.0-er5to27rat2j4dv4dizloxefxfkuusww failed
==> Warning: Skipping build of lcio-2.20-6iizvwsrwtx7ce37dyyyezir5mz7axtw since root-6.28.06-zlynk2kcynq74m5ltkcfoeatst2mnq6a failed
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/vdt-0.4.4-faaulhojgwev6xjhf5o7njyzy2q2v5re
==> Installing sio-0.1-r4dq32vkbopb47btmmye22lexjbs5vud [36/51]
==> No binary for sio-0.1-r4dq32vkbopb47btmmye22lexjbs5vud found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/04/0407c0daeae53660c0562f9302a220f72ab51547050cd9fe9113b995804ab4b4.tar.gz
==> No patches needed for sio
==> sio: Executing phase: 'cmake'
==> sio: Executing phase: 'build'
==> sio: Executing phase: 'install'
==> sio: Successfully installed sio-0.1-r4dq32vkbopb47btmmye22lexjbs5vud
Stage: 3.89s. Cmake: 1m 28.53s. Build: 45.58s. Install: 5.81s. Post-install: 1.34s. Total: 2m 26.70s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/sio-0.1-r4dq32vkbopb47btmmye22lexjbs5vud
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/nlohmann-json-3.11.2-hyjevqal3ghbnnoceh4wwi2reivesccs
==> Installing mesa-glu-9.0.2-ak6wodkone3mqg2v3onyzu3wh6g46536 [38/51]
==> No binary for mesa-glu-9.0.2-ak6wodkone3mqg2v3onyzu3wh6g46536 found: installing from source
patch unexpectedly ends in middle of line
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/cache/_source-cache/archive/24/24effdfb952453cc00e275e1c82ca9787506aba0282145fff054498e60e19a65.tar.gz
==> Applied patch /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/repos/builtin/packages/mesa-glu/register-long.patch
==> mesa-glu: Executing phase: 'autoreconf'
==> mesa-glu: Executing phase: 'configure'
==> Error: ProcessError: Command exited with status 1:
'/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-mesa-glu-9.0.2-ak6wodkone3mqg2v3onyzu3wh6g46536/spack-src/configure' '--prefix=/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/mesa-glu-9.0.2-ak6wodkone3mqg2v3onyzu3wh6g46536' '--disable-libglvnd' '--disable-osmesa'

1 error found in build log:
109 checking for pkg-config... /usr/bin/pkg-config
110 checking pkg-config is at least version 0.9.0... yes
111 checking for GL... no
112 checking GL/gl.h usability... no
113 checking GL/gl.h presence... no
114 checking for GL/gl.h... no
>> 115 configure: error: GL not found

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-mesa-glu-9.0.2-ak6wodkone3mqg2v3onyzu3wh6g46536/spack-build-out.txt

==> Warning: Skipping build of ftgl-2.4.0-3hylparuq5i2z2ty4topgvymlfhbytop since mesa-glu-9.0.2-ak6wodkone3mqg2v3onyzu3wh6g46536 failed
==> Installing gl2ps-1.4.2-4k5xcurzqkglpepnbekcdvckew44uj4c [39/51]
==> No binary for gl2ps-1.4.2-4k5xcurzqkglpepnbekcdvckew44uj4c found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/cache/_source-cache/archive/8d/8d1c00c1018f96b4b97655482e57dcb0ce42ae2f1d349cd6d4191e7848d9ffe9.tgz
==> No patches needed for gl2ps
==> gl2ps: Executing phase: 'cmake'
==> Error: IndexError: list index out of range

/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/repos/builtin/packages/gl2ps/package.py:40, in cmake_args:
37 self.define_from_variant("ENABLE_ZLIB", "zlib"),
38 self.define("OpenGL_GL_PREFERENCE", "LEGACY"),
39 self.define("OPENGL_INCLUDE_DIR", spec["gl"].headers.directories[0]),
>> 40 self.define("OPENGL_gl_LIBRARY", spec["gl"].libs[0]),
41 self.define("OPENGL_opengl_LIBRARY", "IGNORE"),
42 self.define("OPENGL_glx_LIBRARY", "IGNORE"),
43 self.define("OPENGL_egl_LIBRARY", "IGNORE"),

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-gl2ps-1.4.2-4k5xcurzqkglpepnbekcdvckew44uj4c/spack-build-out.txt

[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/unuran-1.8.1-bqnij4ayn7k5i5qvlnxgkpkfnuxx2ctw
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libice-1.0.9-5amk2q7yuvsmnzenzss3zgpx4oisq75a
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libx11-1.8.4-uwfs4whz7y6cxrmbfriae5rjsrkltevg
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libsm-1.2.3-ql5dcoukjfwm4fv7fp4cuvvrcgfhmwo5
==> Installing glew-2.2.0-5bakhvnspvmbtntqw6xkfepcoq6lga7j [44/51]
==> No binary for glew-2.2.0-5bakhvnspvmbtntqw6xkfepcoq6lga7j found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/cache/_source-cache/archive/d4/d4fc82893cfb00109578d0a1a2337fb8ca335b3ceccf97b97e5cc7f08e4353e1.tgz
==> Applied patch /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/repos/builtin/packages/glew/remove-pkgconfig-glu-dep.patch
==> glew: Executing phase: 'cmake'
==> Error: IndexError: list index out of range

/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/repos/builtin/packages/glew/package.py:52, in cmake_args:
49 self.define("GLEW_EGL", False),
50 self.define("OpenGL_GL_PREFERENCE", "LEGACY"),
51 self.define("OPENGL_INCLUDE_DIR", spec["gl"].headers.directories[0]),
>> 52 self.define("OPENGL_gl_LIBRARY", spec["gl"].libs[0]),
53 self.define("OPENGL_opengl_LIBRARY", "IGNORE"),
54 self.define("OPENGL_glx_LIBRARY", "IGNORE"),
55 self.define("OPENGL_egl_LIBRARY", "IGNORE"),

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-glew-2.2.0-5bakhvnspvmbtntqw6xkfepcoq6lga7j/spack-build-out.txt

==> Error: lcio-2.20-6iizvwsrwtx7ce37dyyyezir5mz7axtw: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libxpm-3.5.12-vc4ena325wn2zvugm26gbumskbwvyq2e
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libxrender-0.9.10-q4gwr6md66izqxyvqzgmk5y5mzuyfgmk
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libxext-1.3.3-uw36ft66btmhuje5wqpuvumdkjaliblr
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libxft-2.3.2-iahsdrlqazowdzjdhfutghm6qt7wucg2


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