Spack will be used to manage open source software packages on Fugaku.
Fugaku users can easily use pre-installed packages and built packages based on Spack recipes.
The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes.
Note that the results in this list do not guarantee that each package will work properly.
On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
|
Compiler | Fujitsu Compiler Fujitsu C/C++ Compiler 4.10.0 tcsds-1.2.38 |
---|---|
Result | Dependency Error |
Failed to install dependency package :
------------------------------------------------
==> Warning: config:terminal_title has been replaced by install_status and is ignored
==> Warning: Failed to initialize repository: '$spack/var/spack/repos/local'.
No repo.yaml found in '$spack/var/spack/repos/local'
To remove the bad repository, run this command:
spack repo rm $spack/var/spack/repos/local
[+] /usr (external bzip2-1.0.6-r4iabrte3nd5eemcd5v5coc3kvsnoyzu)
[+] /usr (external xz-5.2.4-l5cq5xund4a2b3ikazvehpmbiao6srbv)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zstd-1.5.5-o7dcxyae4kjgruht44yuloa27ddisxfe
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/gatb-core-1.4.2-fjxogo22w4v5mbe4sh5v3bgujv3cyopo
[+] /usr (external gmake-4.2.1-eszqmok6vi6wxcmklx6bqloeidbh25kb)
==> Installing boost-1.64.0-egxnrbpwljtqc6kmeph2gucz7kcdej74 [7/8]
==> No binary for boost-1.64.0-egxnrbpwljtqc6kmeph2gucz7kcdej74 found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/7b/7bcc5caace97baa948931d712ea5f37038dbb1c5d89b43ad4def4ed7cb683332.tar.bz2
==> Applied patch /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/repos/builtin/packages/boost/boost_218.patch
==> Ran patch() for boost
==> boost: Executing phase: 'install'
==> boost: Successfully installed boost-1.64.0-egxnrbpwljtqc6kmeph2gucz7kcdej74
Stage: 21m 22.22s. Install: 29m 52.95s. Post-install: 5m 5.97s. Total: 56m 25.58s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/boost-1.64.0-egxnrbpwljtqc6kmeph2gucz7kcdej74
==> Installing lordec-0.9-ne4daqwexahvgjf6u6dxz4qwetynipfr [8/8]
==> No binary for lordec-0.9-ne4daqwexahvgjf6u6dxz4qwetynipfr found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/81/8108b82a8404fbf44c7e300d3abb43358ccc28993f90546168a20ca82536923b.tar.bz2
==> No patches needed for lordec
==> lordec: Executing phase: 'edit'
==> lordec: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16' 'clean' 'all'
11 errors found in build log:
11 g++ lordec-correct.cpp -w -Igatb_v1.4.1/include/ -DGATB_V141 -DLORD
ECVERSION=0.9 -DGATBVERSION=1.4.1 -std=c++0x -O3 -c
12 g++ utils.cpp -w -Igatb_v1.4.1/include/ -DGATB_V141 -DLORDECVERSION
=0.9 -DGATBVERSION=1.4.1 -std=c++0x -O3 -c
13 g++ lordec-stat.cpp -w -Igatb_v1.4.1/include/ -DGATB_V141 -DLORDECV
ERSION=0.9 -DGATBVERSION=1.4.1 -std=c++0x -O3 -c
14 g++ lordec-trim.cpp -w -Igatb_v1.4.1/include/ -DGATB_V141 -DLORDECV
ERSION=0.9 -DGATBVERSION=1.4.1 -std=c++0x -O3 -c
15 g++ lordec-trim-split.cpp -w -Igatb_v1.4.1/include/ -DGATB_V141 -DL
ORDECVERSION=0.9 -DGATBVERSION=1.4.1 -std=c++0x -O3 -c
16 g++ lordec-build-SR-graph.cpp -o lordec-build-SR-graph -w -w -Igat
b_v1.4.1/include/ -DGATB_V141 -DLORDECVERSION=0.9 -DGATBVERSION=1.4
.1 -std=c++0x -O3 -Lgatb_v1.4.1/lib/ -lgatbcore -lhdf5 -ldl -lz -l
pthread -std=c++0x -O3
>> 17 lordec-trim-split.cpp:39:10: fatal error: gatb/gatb_core.hpp: No suc
h file or directory
18 #include <gatb/gatb_core.hpp>
19 ^~~~~~~~~~~~~~~~~~~~
20 compilation terminated.
>> 21 lordec-build-SR-graph.cpp:7:10: fatal error: gatb/gatb_core.hpp: No
such file or directory
22 #include <gatb/gatb_core.hpp>
23 ^~~~~~~~~~~~~~~~~~~~
24 compilation terminated.
>> 25 lordec-stat.cpp:40:10: fatal error: gatb/gatb_core.hpp: No such file
or directory
26 #include <gatb/gatb_core.hpp>
27 ^~~~~~~~~~~~~~~~~~~~
28 compilation terminated.
>> 29 lordec-trim.cpp:40:10: fatal error: gatb/gatb_core.hpp: No such file
or directory
30 #include <gatb/gatb_core.hpp>
31 ^~~~~~~~~~~~~~~~~~~~
32 compilation terminated.
>> 33 make[1]: *** [Makefile:149: lordec-trim-split.o] Error 1
34 make[1]: *** Waiting for unfinished jobs....
>> 35 make[1]: *** [Makefile:119: lordec-build-SR-graph] Error 1
>> 36 make[1]: *** [Makefile:143: lordec-stat.o] Error 1
>> 37 make[1]: *** [Makefile:146: lordec-trim.o] Error 1
38 In file included from lordec-correct.cpp:37:
>> 39 lordec-correct.h:9:10: fatal error: boost/graph/graph_traits.hpp: No
such file or directory
40 #include <boost/graph/graph_traits.hpp>
41 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
42 compilation terminated.
>> 43 make[1]: *** [Makefile:140: lordec-correct.o] Error 1
44 make[1]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/spa
ck-stage/spack-stage-lordec-0.9-ne4daqwexahvgjf6u6dxz4qwetynipfr/spa
ck-src'
>> 45 make: *** [Makefile:158: lordec_141] Error 2
See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-lordec-0.9-ne4daqwexahvgjf6u6dxz4qwetynipfr/spack-build-out.txt