Failed Reason

Failed to install dependency package :
------------------------------------------------
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:1187: undefined reference to `curl_easy_getinfo'
318 ../lib/htslib//libhts.a(hfile_libcurl.o): In function `restart_from
_position':
>> 319 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:926: undefined reference to `curl_easy_setopt'
>> 320 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:945: undefined reference to `curl_easy_duphandle'
>> 321 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:949: undefined reference to `curl_easy_setopt'
>> 322 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:950: undefined reference to `curl_easy_setopt'
>> 323 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:951: undefined reference to `curl_easy_setopt'
>> 324 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:961: undefined reference to `curl_multi_add_handle'
>> 325 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:1028: undefined reference to `curl_easy_cleanup'
>> 326 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:1028: undefined reference to `curl_easy_cleanup'
>> 327 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:968: undefined reference to `curl_easy_pause'
>> 328 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:988: undefined reference to `curl_multi_remove_handle
'
>> 329 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:1001: undefined reference to `curl_easy_cleanup'
>> 330 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:1003: undefined reference to `curl_easy_setopt'
>> 331 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:1004: undefined reference to `curl_easy_setopt'
>> 332 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:1020: undefined reference to `curl_easy_reset'
>> 333 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:1021: undefined reference to `curl_multi_remove_handl
e'
>> 334 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:991: undefined reference to `curl_easy_reset'
>> 335 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:992: undefined reference to `curl_multi_remove_handle
'
>> 336 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:994: undefined reference to `curl_easy_cleanup'
>> 337 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:1007: undefined reference to `curl_easy_reset'
338 ../lib/htslib//libhts.a(hfile_libcurl.o): In function `libcurl_read
':
>> 339 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:763: undefined reference to `curl_easy_pause'
340 ../lib/htslib//libhts.a(hfile_libcurl.o): In function `hfile_plugin
_init_libcurl':
>> 341 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:1351: undefined reference to `curl_global_init'
>> 342 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:1354: undefined reference to `curl_share_init'
>> 343 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:1356: undefined reference to `curl_share_setopt'
>> 344 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:1357: undefined reference to `curl_share_setopt'
>> 345 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:1358: undefined reference to `curl_share_setopt'
>> 346 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:1384: undefined reference to `curl_version_info'
>> 347 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:1360: undefined reference to `curl_share_cleanup'
>> 348 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:1361: undefined reference to `curl_global_cleanup'
>> 349 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:1373: undefined reference to `curl_share_cleanup'
>> 350 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_libcurl.c:1374: undefined reference to `curl_global_cleanup'
351 ../lib/htslib//libhts.a(hfile_s3.o): In function `s3_sign':
>> 352 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_s3.c:77: undefined reference to `EVP_sha1'
>> 353 /vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-nextde
novo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/lib/htslib/hf
ile_s3.c:77: undefined reference to `HMAC'
>> 354 collect2: error: ld returned 1 exit status
>> 355 make[1]: *** [Makefile:30: bam_sort] Error 1
356 make[1]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/sp
ack-stage/spack-stage-nextdenovo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo
33uu/spack-src/util'
357 make[1]: warning: jobserver unavailable: using -j1. Add '+' to par
ent make rule.
358 make[1]: Entering directory '/vol0003/rccs-sdt/data/a01008/tmpdir/s
pack-stage/spack-stage-nextdenovo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gw
o33uu/spack-src/lib'
359 gcc -std=c99 -O3 -Wall -Wno-unused-function -fPIC -shared -o nextc
orrect.so align.c dag.c nextcorrect.c
360 gcc -std=c99 -O3 -Wall -Wno-unused-function -fPIC -shared -o ovlse
q.so ovlseq.c bseq.c ovl.c index.c -lz
361 gcc -std=c99 -O3 -Wall -Wno-unused-function -fPIC -shared -o ctg_c
ns.so bseq.c align.c bsort.c dag.c ctg_cns.c htslib//libhts.a -D_SV
ID_SOURCE -DLGS_CORRECT -I ./htslib/ -lm -lpthread -lz

...

394 /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _
SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
395 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAU
LT_SOURCE"
396 ^~~~~~~
397 gcc -std=c99 -O3 -Wall -Wno-unused-function -fPIC -shared -o ckit.
so kit.c bseq.c -lz
398 make[1]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/sp
ack-stage/spack-stage-nextdenovo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo
33uu/spack-src/lib'
399 cp /data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-nextdenovo-
2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/minimap2/minimap2-
nd /data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-nextdenovo-
2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/bin/
>> 400 cp: cannot stat '/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-sta
ge-nextdenovo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-src/mini
map2/minimap2-nd': No such file or directory
>> 401 make: *** [Makefile:10: all] Error 1

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-nextdenovo-2.5.2-lepbpa4ab3i6ie2l7xdennf55gwo33uu/spack-build-out.txt