List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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ninja-phylogeny 0.98

Compiler Fujitsu Compiler Fujitsu C/C++ Compiler 4.10.0 tcsds-1.2.38
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
==> Warning: config:terminal_title has been replaced by install_status and is ignored
==> Warning: Failed to initialize repository: '$spack/var/spack/repos/local'.
No repo.yaml found in '$spack/var/spack/repos/local'
To remove the bad repository, run this command:
spack repo rm $spack/var/spack/repos/local
[+] /usr (external gmake-4.2.1-eszqmok6vi6wxcmklx6bqloeidbh25kb)
==> Installing ninja-phylogeny-0.98-4jhnkubvsipni2euzt2wmtfoio3y7fv6 [2/2]
==> No binary for ninja-phylogeny-0.98-4jhnkubvsipni2euzt2wmtfoio3y7fv6 found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/55/55675e1a9d51eddb3decc9a7570b6bcddb12e8a922cf1ca0a1ea43995793c9db.tar.gz
==> No patches needed for ninja-phylogeny
==> ninja-phylogeny: Executing phase: 'edit'
==> ninja-phylogeny: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16'

12 errors found in build log:
38 /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/lib/
spack/env/fj/case-insensitive/FCC -std=gnu++11 -Wall -mssse3 -fopenm
p -O3 -c -o TreeBuilderManager.o TreeBuilderManager.cpp
39 /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/lib/
spack/env/fj/case-insensitive/FCC -std=gnu++11 -Wall -mssse3 -fopenm
p -O3 -c -o ClusterManager.o ClusterManager.cpp
40 /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/lib/
spack/env/fj/case-insensitive/FCC -std=gnu++11 -Wall -mssse3 -fopenm
p -O3 -c -o TreeNode.o TreeNode.cpp
41 In file included from Ninja.cpp:7:
42 In file included from ./TreeBuilderManager.hpp:10:
43 In file included from ./DistanceReader.hpp:8:
>> 44 ./DistanceCalculator.hpp:15:10: fatal error: 'xmmintrin.h' file not
found
45 #include <xmmintrin.h> /* SSE */
46 ^~~~~~~~~~~~~
47 In file included from DistanceReader.cpp:7:
48 In file included from ./DistanceReader.hpp:8:
>> 49 ./DistanceCalculator.hpp:15:10: fatal error: 'xmmintrin.h' file not
found
50 #include <xmmintrin.h> /* SSE */
51 ^~~~~~~~~~~~~
52 In file included from DistanceCalculator.cpp:7:
>> 53 ./DistanceCalculator.hpp:15:10: fatal error: 'xmmintrin.h' file not
found
54 #include <xmmintrin.h> /* SSE */
55 ^~~~~~~~~~~~~
56 In file included from DistanceReaderExtMem.cpp:8:
57 In file included from ./DistanceReaderExtMem.hpp:8:
>> 58 ./DistanceCalculator.hpp:15:10: fatal error: 'xmmintrin.h' file not
found
59 #include <xmmintrin.h> /* SSE */
60 ^~~~~~~~~~~~~
61 1 error generated.
62 1 error generated.
>> 63 make: *** [<builtin>: DistanceReaderExtMem.o] Error 1
64 make: *** Waiting for unfinished jobs....
65 1 error generated.
>> 66 make: *** [<builtin>: Ninja.o] Error 1
>> 67 make: *** [<builtin>: DistanceReader.o] Error 1
68 1 error generated.
>> 69 make: *** [<builtin>: DistanceCalculator.o] Error 1
70 clang-7: warning: argument unused during compilation: '-mssse3' [-Wu
nused-command-line-argument]
71 clang-7: warning: argument unused during compilation: '-mssse3' [-Wu
nused-command-line-argument]
72 clang-7: warning: argument unused during compilation: '-mssse3' [-Wu
nused-command-line-argument]
73 clang-7: warning: argument unused during compilation: '-mssse3' [-Wu
nused-command-line-argument]
74 In file included from TreeBuilderManager.cpp:8:
75 In file included from ./TreeBuilderManager.hpp:10:
76 In file included from ./DistanceReader.hpp:8:
>> 77 ./DistanceCalculator.hpp:15:10: fatal error: 'xmmintrin.h' file not
found
78 #include <xmmintrin.h> /* SSE */
79 ^~~~~~~~~~~~~
80 In file included from ClusterManager.cpp:12:
81 In file included from ./ClusterManager.hpp:9:
82 In file included from ./DistanceReader.hpp:8:
>> 83 ./DistanceCalculator.hpp:15:10: fatal error: 'xmmintrin.h' file not
found
84 #include <xmmintrin.h> /* SSE */
85 ^~~~~~~~~~~~~
86 1 error generated.
>> 87 make: *** [<builtin>: ClusterManager.o] Error 1
88 1 error generated.
>> 89 make: *** [<builtin>: TreeBuilderManager.o] Error 1

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-ninja-phylogeny-0.98-4jhnkubvsipni2euzt2wmtfoio3y7fv6/spack-build-out.txt


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