List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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notmuch 0.23.7

Compiler Fujitsu Compiler Fujitsu C/C++ Compiler 4.10.0 tcsds-1.2.38
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
[+] /vol0004/apps/oss/spack-v0.19/opt/spack/linux-rhel8-a64fx/fj-4.8.1/python-3.10.8-7q66snjvhvy7im57hncbgpirmddrb5sk (external python-3.10.8-zcbuy6dnhwhmsrco46b6ayaywy4nrfcy)
[+] /usr (external perl-5.26.3-rkgbbov2pluaat3kknhtag5ui3vltkqk)
[+] /usr (external pkgconf-1.4.2-mmjuloqcob6vnd6bylwgum67waaa3kht)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/gnuconfig-2022-09-17-w33oejhx46ex2iql4orzjqdmt2kdqdb2
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/py-setuptools-68.0.0-umhokgnekqyzlgjhl6pifea67uvzwnge
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/pcre2-10.42-6kbyqamjjurixzzgishkv3abmew2p6xx
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libgpg-error-1.47-bk6rwdkodbomfs556fio35g7o6lhnfw6
==> Installing talloc-2.4.0-fmilmexuk3d4xwymkxl4qu4aaqfseurd [14/20]
==> No binary for talloc-2.4.0-fmilmexuk3d4xwymkxl4qu4aaqfseurd found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/6d/6df36862c42466ef88f360444513870ef46934f9016c84383cc4008a7d0c46ba.tar.gz
==> No patches needed for talloc
==> talloc: Executing phase: 'autoreconf'
==> talloc: Executing phase: 'configure'
==> talloc: Executing phase: 'build'
==> talloc: Executing phase: 'install'
==> talloc: Successfully installed talloc-2.4.0-fmilmexuk3d4xwymkxl4qu4aaqfseurd
Stage: 13.12s. Autoreconf: 0.27s. Configure: 7m 21.66s. Build: 26.48s. Install: 7.88s. Post-install: 3.64s. Total: 8m 13.80s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/talloc-2.4.0-fmilmexuk3d4xwymkxl4qu4aaqfseurd
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libiconv-1.17-nh4rfr3f3pcowrx2xcn2l45yyfy3xzk6
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/meson-1.2.2-twpubak4adlis5o22xnr6hnwwalqpco3
==> Installing xapian-core-1.4.19-lvylrudtucg3s62wu3mkff6jx2ym3vqv [17/20]
==> No binary for xapian-core-1.4.19-lvylrudtucg3s62wu3mkff6jx2ym3vqv found: installing from source
==> Fetching https://spack-llnl-mirror.s3-us-west-2.amazonaws.com/_source-cache/archive/1f/1fca48fca6cc3526cc4ba93dd194fe9c1326857b78edcfb37e68d086d714a9c3.tar.xz
==> No patches needed for xapian-core
==> xapian-core: Executing phase: 'autoreconf'
==> xapian-core: Executing phase: 'configure'
==> xapian-core: Executing phase: 'build'
==> xapian-core: Executing phase: 'install'
==> xapian-core: Successfully installed xapian-core-1.4.19-lvylrudtucg3s62wu3mkff6jx2ym3vqv
Stage: 33.24s. Autoreconf: 1.30s. Configure: 2m 21.89s. Build: 6m 37.72s. Install: 23.97s. Post-install: 10.99s. Total: 10m 10.23s
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/xapian-core-1.4.19-lvylrudtucg3s62wu3mkff6jx2ym3vqv
==> Installing glib-2.78.0-74p33i3rlx64dojcar5xzu3de6xzra6v [18/20]
==> No binary for glib-2.78.0-74p33i3rlx64dojcar5xzu3de6xzra6v found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/cache/_source-cache/archive/44/44eaab8b720877ce303c5540b657b126f12dc94972d9880b52959f43fb537b30.tar.xz
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/cache/_source-cache/archive/2c/2c25d7b3bf581b3ec992d7af997fa6c769174d49b9350e0320c33f5e048cba99
==> Applied patch https://gitlab.gnome.org/GNOME/glib/-/commit/bda87264372c006c94e21ffb8ff9c50ecb3e14bd.diff
==> Ran patch() for glib
==> glib: Executing phase: 'meson'
==> glib: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 1:
'ninja' '-j16' '-v'

4 errors found in build log:
3849 [911/1470] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-202402
27/spack/lib/spack/env/fj/fcc -Igio/tests/appinfo-test.p -Igio/tes
ts -I../spack-src/gio/tests -I. -I../spack-src -Iglib -I../spack-s
rc/glib -Igmodule -I../spack-src/gmodule -Igobject -I../spack-src/
gobject -Igio -I../spack-src/gio -fcolor-diagnostics -D_FILE_OFFSE
T_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=gnu99 -O3 -D
_GNU_SOURCE -fno-strict-aliasing -DG_DISABLE_CAST_CHECKS -Wduplica
ted-branches -Wimplicit-fallthrough -Wmisleading-indentation -Wmis
sing-field-initializers -Wnonnull -Wunused -Wno-unused-parameter -
Wno-cast-function-type -Wno-pedantic -Wno-format-zero-length -Wno-
variadic-macros -Werror=format=2 -Werror=init-self -Werror=missing
-include-dirs -Werror=pointer-arith -Werror=unused-result -Wstrict
-prototypes -Wno-bad-function-cast -Werror=implicit-function-decla
ration -Werror=missing-prototypes -Werror=pointer-sign -Wno-string
-plus-int '-DG_LOG_DOMAIN="GLib-GIO"' '-DGLIB_MKENUMS="gobject/gli
b-mkenums"' '-DGLIB_COMPILE_SCHEMAS="/vol0003/rccs-sdt/data/a01008
/tmpdir/spack-stage/spack-stage-glib-2.78.0-74p33i3rlx64dojcar5xzu
3de6xzra6v/spack-build-74p33i3/gio/glib-compile-schemas"' -UG_DISA
BLE_ASSERT -DHAVE_OPENPTY -MD -MQ gio/tests/appinfo-test.p/appinfo
-test.c.o -MF gio/tests/appinfo-test.p/appinfo-test.c.o.d -o gio/t
ests/appinfo-test.p/appinfo-test.c.o -c ../spack-src/gio/tests/app
info-test.c
3850 warning: unknown warning option '-Wduplicated-branches' [-Wunknown
-warning-option]
3851 warning: unknown warning option '-Wmisleading-indentation'; did yo
u mean '-Wbinding-in-condition'? [-Wunknown-warning-option]
3852 warning: unknown warning option '-Wno-cast-function-type'; did you
mean '-Wno-bad-function-cast'? [-Wunknown-warning-option]
3853 3 warnings generated.
3854 [912/1470] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-202402
27/spack/lib/spack/env/fj/fcc -Wl,-z,noexecstack -r -Wl,-b,binary
-nostdlib gio/tests/test5.gresource -o gio/tests/test_resources.o
>> 3855 FAILED: gio/tests/test_resources.o
3856 /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/li
b/spack/env/fj/fcc -Wl,-z,noexecstack -r -Wl,-b,binary -nostdlib g
io/tests/test5.gresource -o gio/tests/test_resources.o
>> 3857 /usr/bin/ld: cannot find -lfjprofcore
>> 3858 /usr/bin/ld: cannot find -lfjprofomp
>> 3859 clang-7: error: linker command failed with exit code 1 (use -v to
see invocation)
3860 [913/1470] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-202402
27/spack/lib/spack/env/fj/fcc -o gio/tests/gdbus-connection-flush
-helper gio/tests/gdbus-connection-flush-helper.p/gdbus-connection
-flush-helper.c.o -Wl,--as-needed -Wl,--no-undefined -Wl,-O1 '-Wl,
-rpath,$ORIGIN/../../glib:$ORIGIN/../../gmodule:$ORIGIN/../../gobj
ect:$ORIGIN/..:/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20
240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/pcre2-10.42-6kb
yqamjjurixzzgishkv3abmew2p6xx/lib:/vol0003/rccs-sdt/data/a01008/sp
ack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.1
0.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3/lib' -Wl,-rpath
-link,/vol0003/rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage
-glib-2.78.0-74p33i3rlx64dojcar5xzu3de6xzra6v/spack-build-74p33i3/
glib -Wl,-rpath-link,/vol0003/rccs-sdt/data/a01008/tmpdir/spack-st
age/spack-stage-glib-2.78.0-74p33i3rlx64dojcar5xzu3de6xzra6v/spack
-build-74p33i3/gmodule -Wl,-rpath-link,/vol0003/rccs-sdt/data/a010
08/tmpdir/spack-stage/spack-stage-glib-2.78.0-74p33i3rlx64dojcar5x
zu3de6xzra6v/spack-build-74p33i3/gobject -Wl,-rpath-link,/vol0003/
rccs-sdt/data/a01008/tmpdir/spack-stage/spack-stage-glib-2.78.0-74
p33i3rlx64dojcar5xzu3de6xzra6v/spack-build-74p33i3/gio -Wl,-rpath-
link,/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spa
ck/opt/spack/linux-rhel8-a64fx/fj-4.10.0/pcre2-10.42-6kbyqamjjurix
zzgishkv3abmew2p6xx/lib -Wl,-rpath-link,/vol0003/rccs-sdt/data/a01
008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/
fj-4.10.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3/lib -Wl,-
-start-group glib/libglib-2.0.so.0.7800.0 gmodule/libgmodule-2.0.s
o.0.7800.0 gobject/libgobject-2.0.so.0.7800.0 gio/libgio-2.0.so.0.
7800.0 -Wl,--end-group
3861 [914/1470] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-202402
27/spack/lib/spack/env/fj/fcc -Igio/tests/fake-document-portal.p -
Igio/tests -I../spack-src/gio/tests -I. -I../spack-src -Iglib -I..
/spack-src/glib -Igmodule -I../spack-src/gmodule -Igobject -I../sp
ack-src/gobject -Igio -I../spack-src/gio -fcolor-diagnostics -D_FI
LE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=gnu9
9 -O3 -D_GNU_SOURCE -fno-strict-aliasing -DG_DISABLE_CAST_CHECKS -
Wduplicated-branches -Wimplicit-fallthrough -Wmisleading-indentati
on -Wmissing-field-initializers -Wnonnull -Wunused -Wno-unused-par
ameter -Wno-cast-function-type -Wno-pedantic -Wno-format-zero-leng
th -Wno-variadic-macros -Werror=format=2 -Werror=init-self -Werror
=missing-include-dirs -Werror=pointer-arith -Werror=unused-result
-Wstrict-prototypes -Wno-bad-function-cast -Werror=implicit-functi
on-declaration -Werror=missing-prototypes -Werror=pointer-sign -Wn
o-string-plus-int '-DG_LOG_DOMAIN="GLib-GIO"' '-DGLIB_MKENUMS="gob
ject/glib-mkenums"' '-DGLIB_COMPILE_SCHEMAS="/vol0003/rccs-sdt/dat
a/a01008/tmpdir/spack-stage/spack-stage-glib-2.78.0-74p33i3rlx64do
jcar5xzu3de6xzra6v/spack-build-74p33i3/gio/glib-compile-schemas"'
-UG_DISABLE_ASSERT -DHAVE_OPENPTY -MD -MQ gio/tests/fake-document-
portal.p/meson-generated_.._fake-document-portal-generated.c.o -MF
gio/tests/fake-document-portal.p/meson-generated_.._fake-document
-portal-generated.c.o.d -o gio/tests/fake-document-portal.p/meson-
generated_.._fake-document-portal-generated.c.o -c gio/tests/fake-
document-portal-generated.c
3862 warning: unknown warning option '-Wduplicated-branches' [-Wunknown
-warning-option]
3863 warning: unknown warning option '-Wmisleading-indentation'; did yo
u mean '-Wbinding-in-condition'? [-Wunknown-warning-option]
3864 warning: unknown warning option '-Wno-cast-function-type'; did you
mean '-Wno-bad-function-cast'? [-Wunknown-warning-option]
3865 3 warnings generated.

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-glib-2.78.0-74p33i3rlx64dojcar5xzu3de6xzra6v/spack-build-out.txt

==> Warning: Skipping build of gmime-2.6.23-skttwl5ntw2vgif4zrnx43oireumn4jk since glib-2.78.0-74p33i3rlx64dojcar5xzu3de6xzra6v failed
==> Warning: Skipping build of notmuch-0.23.7-darch6iazzwhmyue7gx6fth6eckfjjb4 since gmime-2.6.23-skttwl5ntw2vgif4zrnx43oireumn4jk failed
==> Error: notmuch-0.23.7-darch6iazzwhmyue7gx6fth6eckfjjb4: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).


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