List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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ophidia-analytics-framework 1.7.3

Compiler Fujitsu Compiler Fujitsu C/C++ Compiler 4.10.0 tcsds-1.2.38
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
==> Warning: config:terminal_title has been replaced by install_status and is ignored
==> Warning: Failed to initialize repository: '$spack/var/spack/repos/local'.
No repo.yaml found in '$spack/var/spack/repos/local'
To remove the bad repository, run this command:
spack repo rm $spack/var/spack/repos/local
==> Warning: using "openssl@1.1.1k" which is a deprecated version
[+] /usr (external autoconf-2.69-titfazaulrbnqxmahzxzof53lmsnabip)
[+] /usr (external automake-1.16.1-fryterkxezzfuo7itm4kijqfnazo5uk4)
[+] /usr (external curl-7.61.1-qsvgylcys5hkzdnl2pdh4blrprxlsp5m)
[+] /usr (external gmake-4.2.1-eszqmok6vi6wxcmklx6bqloeidbh25kb)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/gnuconfig-2022-09-17-w33oejhx46ex2iql4orzjqdmt2kdqdb2
[+] /usr (external jansson-2.14-plxb4de3l6i5q3lamylme622frrz7m62)
[+] /usr (external openssl-1.1.1k-bprmjv6lxavt4jwalf6ucpmia7oubuqp)
[+] /usr (external xz-5.2.4-l5cq5xund4a2b3ikazvehpmbiao6srbv)
[+] /usr (external libtool-2.4.6-c63win5txkc7eap5ppbbjjoaqyj5i6wx)
[+] /usr (external libxml2-2.9.7-psbfksllqwmljlwwnb24enmihejo6ws6)
[+] /usr (external m4-1.4.18-craoyd3hmfdcanz7zxglna5yxcvdtoem)
[+] /usr (external findutils-4.6.0-vpyxhw7k56cggd3eivugcb23yr5ttano)
[+] /usr (external hwloc-2.2.0-uek4abd3fnx3x4ulqymndgwqr7ib3cu3)
[+] /usr (external libfabric-1.14.0-54333id6ifmr7wzn2kwg2icojtsmbn76)
[+] /usr (external libpciaccess-0.14-5v7kdzaldflq3xxitcnxlc2swcce2hpp)
[+] /usr (external pkgconf-1.4.2-mmjuloqcob6vnd6bylwgum67waaa3kht)
[+] /usr (external gettext-0.19.8.1-6jl23wn6jpwquhvqibpwhvia7vxsgrq3)
[+] /usr (external ncurses-6.1-a6lc7oq2dlgphtibbpp6x72mqgmscros)
[+] /usr (external libedit-3.1-ux4kuci6bussthhfjp5hadpzdjflft7e)
[+] /usr (external perl-5.26.3-rkgbbov2pluaat3kknhtag5ui3vltkqk)
[+] /usr (external bzip2-1.0.6-r4iabrte3nd5eemcd5v5coc3kvsnoyzu)
[+] /usr (external lz4-1.8.3-ldbpdr7ujm6p5vdasnwd2ujsioqi34gf)
[+] /opt/FJSVxtclanga/tcsds-mpi-latest (external fujitsu-mpi-head-3njd5uwuazr4j2no6fqh4cpjmezknh3z)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zstd-1.5.5-o7dcxyae4kjgruht44yuloa27ddisxfe
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/snappy-1.1.10-j7x2zk63lmbm36rc724j3ik66antzv5k
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libaec-1.0.6-5mds5a4x6u7m2ysxqxxgm2l6tpax77ds
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/gsl-2.7.1-6mx2lcmimqbuoeralzd5dqmp7f73t77k
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/cyrus-sasl-2.1.28-juqcum6v5gls5acywhd5akhej4djp45g
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/yaksa-0.3-abxkbnf6l47u73qc33gav5xekazjapgw
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/flex-2.6.3-udlfzibabfli2hc4lyhfxk7p5xd3pv4f
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/rpcsvc-proto-1.4.3-fhadmt3mj5rritf7o5fwwwmu4eemetoe
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/bison-3.8.2-kviw7pt3aorzqonkoy2vxqd5nzod5xdv
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/hdf5-1.14.3-qxnacxgse3udxh7b6wscu6iz3vsyvu6a
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/cmake-3.27.7-ussgjuqkqbxi5dcv7kbp6bugdcjc5ph6
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libssh2-1.11.0-3kivdsvp5wxsbkqlkbihlrmkkbgy7cuk
==> Installing mpich-4.1.2-mlt4nukyzfj52c6h5am56lt2sr4rqnux [38/45]
==> No binary for mpich-4.1.2-mlt4nukyzfj52c6h5am56lt2sr4rqnux found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/cache/_source-cache/archive/34/3492e98adab62b597ef0d292fb2459b6123bc80070a8aa0a30be6962075a12f0.tar.gz
==> No patches needed for mpich
==> mpich: Executing phase: 'autoreconf'
==> mpich: Executing phase: 'configure'
==> Error: ProcessError: Command exited with status 1:
'/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-mpich-4.1.2-mlt4nukyzfj52c6h5am56lt2sr4rqnux/spack-src/configure' '--prefix=/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/mpich-4.1.2-mlt4nukyzfj52c6h5am56lt2sr4rqnux' '--disable-maintainer-mode' '--disable-silent-rules' '--enable-shared' '--with-pm=hydra' '--enable-romio' '--without-ibverbs' '--enable-wrapper-rpath=yes' '--with-yaksa=/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/yaksa-0.3-abxkbnf6l47u73qc33gav5xekazjapgw' '--with-hwloc=/usr' '--with-slurm=no' '--with-pmi=simple' '--without-cuda' '--without-hip' '--with-device=ch4:ofi' '--with-libfabric=/usr' '--enable-libxml2' '--with-datatype-engine=auto'

1 error found in build log:
195 checking whether C compiler accepts option -fPIE... yes
196 checking whether routines compiled with -fPIE can be linked with on
es compiled without -fPIE... yes
197 configure: RUNNING PREREQ FOR CH4 DEVICE
198 checking rdma/fabric.h usability... no
199 checking rdma/fabric.h presence... no
200 checking for rdma/fabric.h... no
>> 201 configure: error: --with-libfabric is given but not found

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-mpich-4.1.2-mlt4nukyzfj52c6h5am56lt2sr4rqnux/spack-build-out.txt

==> Warning: Skipping build of ophidia-analytics-framework-1.7.3-5eyjbukjynvlzkiahzk5vfavmnvutnf2 since mpich-4.1.2-mlt4nukyzfj52c6h5am56lt2sr4rqnux failed
==> Warning: mysql-5.6.44-ox4bgphv433gbf7yigj42kuxcxccbrr5 failed to install
==> Warning: Skipping build of ophidia-primitives-1.7.1-lyfwxfbb5dkmjhlgjmlww4np6avaqbzc since mysql-5.6.44-ox4bgphv433gbf7yigj42kuxcxccbrr5 failed
==> Warning: Skipping build of ophidia-io-server-1.7.3-cvct4ditdkyt5crtfnav54mce7bd5r5g since ophidia-primitives-1.7.1-lyfwxfbb5dkmjhlgjmlww4np6avaqbzc failed
==> Error: ophidia-analytics-framework-1.7.3-5eyjbukjynvlzkiahzk5vfavmnvutnf2: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/libmatheval-1.1.11-ks5oqjeqhdb33nknz4ysojwzqxdzi43n
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/c-blosc-1.21.5-66ynsnfbl2evrc6id523jcamtzvu2ugx
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/netcdf-c-4.9.2-gnv35ekwuowxz4iyaik777xaxvno4pvm
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/boost-1.79.0-cuatwwvsqlsu33jdi4zp5xyj3uqyeyrg


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