List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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phantompeakqualtools 1.2

Compiler Fujitsu Compiler Fujitsu C/C++ Compiler 4.10.0 tcsds-1.2.38
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
ef:69:21: note: previous definition is here
451 template<> struct __byte_operand<bool> { using __type = byte; };
452 ^
>> 453 /usr/lib/gcc/aarch64-redhat-linux/8/../../../../include/c++/8/cstdd
ef:80:21: error: explicit specialization of non-template struct '__
byte_operand'
454 template<> struct __byte_operand<int> { using __type = byte; };
455 ^ ~~~~~
456 fatal error: too many errors emitted, stopping now [-ferror-limit=]
457 1 warning and 20 errors generated.
>> 458 make: *** [/vol0003/rccs-sdt/data/a01008/spack-all-test/env-2024022
7/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/r-4.3.0-e2kmfv2xhv67e
5xxdvt4xlpswqw7q26t/rlib/R/etc/Makeconf.spack:198: maqread.o] Error
1
>> 459 bed2vector.cpp:118:25: error: reference to 'hash' is ambiguous
460 hash_map<string, int, hash<string>,equal_to<string> > cind_map;
461 ^
462 /usr/lib/gcc/aarch64-redhat-linux/8/../../../../include/c++/8/syste
m_error:142:12: note: candidate found by name lookup is 'std::hash'
463 struct hash;
464 ^
465 /usr/lib/gcc/aarch64-redhat-linux/8/../../../../include/c++/8/backw
ard/hash_fun.h:68:12: note: candidate found by name lookup is '__gn
u_cxx::hash'
466 struct hash { };
467 ^
>> 468 bed2vector.cpp:118:29: error: expected '>'
469 hash_map<string, int, hash<string>,equal_to<string> > cind_map;
470 ^
>> 471 bed2vector.cpp:163:29: error: reference to 'hash' is ambiguous
472 hash_map<string, int, hash<string>,equal_to<string> >::const_
iterator li=cind_map.find(chr);
473 ^
474 /usr/lib/gcc/aarch64-redhat-linux/8/../../../../include/c++/8/syste
m_error:142:12: note: candidate found by name lookup is 'std::hash'
475 struct hash;
476 ^
477 /usr/lib/gcc/aarch64-redhat-linux/8/../../../../include/c++/8/backw
ard/hash_fun.h:68:12: note: candidate found by name lookup is '__gn
u_cxx::hash'
478 struct hash { };
479 ^
>> 480 bed2vector.cpp:163:33: error: expected '>'
481 hash_map<string, int, hash<string>,equal_to<string> >::const_
iterator li=cind_map.find(chr);
482 ^
>> 483 bed2vector.cpp:165:10: error: use of undeclared identifier 'li'
484 if(li==cind_map.end()) {
485 ^
>> 486 bed2vector.cpp:165:14: error: use of undeclared identifier 'cind_ma
p'
487 if(li==cind_map.end()) {
488 ^
>> 489 bed2vector.cpp:169:2: error: use of undeclared identifier 'cind_map
'
490 cind_map[chr]=cind;
491 ^
>> 492 bed2vector.cpp:176:7: error: use of undeclared identifier 'li'
493 cind=li->second;
494 ^
>> 495 bed2vector.cpp:254:25: error: reference to 'hash' is ambiguous
496 hash_map<string, int, hash<string>,equal_to<string> > cind_map;
497 ^
498 /usr/lib/gcc/aarch64-redhat-linux/8/../../../../include/c++/8/syste
m_error:142:12: note: candidate found by name lookup is 'std::hash'
499 struct hash;
500 ^
501 /usr/lib/gcc/aarch64-redhat-linux/8/../../../../include/c++/8/backw
ard/hash_fun.h:68:12: note: candidate found by name lookup is '__gn
u_cxx::hash'
502 struct hash { };
503 ^
>> 504 bed2vector.cpp:254:29: error: expected '>'
505 hash_map<string, int, hash<string>,equal_to<string> > cind_map;
506 ^
>> 507 bed2vector.cpp:296:29: error: reference to 'hash' is ambiguous
508 hash_map<string, int, hash<string>,equal_to<string> >::const_
iterator li=cind_map.find(chr);
509 ^
510 /usr/lib/gcc/aarch64-redhat-linux/8/../../../../include/c++/8/syste
m_error:142:12: note: candidate found by name lookup is 'std::hash'
511 struct hash;
512 ^
513 /usr/lib/gcc/aarch64-redhat-linux/8/../../../../include/c++/8/backw
ard/hash_fun.h:68:12: note: candidate found by name lookup is '__gn
u_cxx::hash'
514 struct hash { };
515 ^
>> 516 bed2vector.cpp:296:33: error: expected '>'
517 hash_map<string, int, hash<string>,equal_to<string> >::const_
iterator li=cind_map.find(chr);
518 ^
>> 519 bed2vector.cpp:298:10: error: use of undeclared identifier 'li'
520 if(li==cind_map.end()) {
521 ^
>> 522 bed2vector.cpp:298:14: error: use of undeclared identifier 'cind_ma
p'
523 if(li==cind_map.end()) {
524 ^
>> 525 bed2vector.cpp:302:2: error: use of undeclared identifier 'cind_map
'
526 cind_map[chr]=cind;
527 ^
>> 528 bed2vector.cpp:311:7: error: use of undeclared identifier 'li'
529 cind=li->second;
530 ^
>> 531 bed2vector.cpp:432:25: error: reference to 'hash' is ambiguous
532 hash_map<string, int, hash<string>,equal_to<string> > cind_map;
533 ^
534 /usr/lib/gcc/aarch64-redhat-linux/8/../../../../include/c++/8/syste
m_error:142:12: note: candidate found by name lookup is 'std::hash'
535 struct hash;
536 ^
537 /usr/lib/gcc/aarch64-redhat-linux/8/../../../../include/c++/8/backw
ard/hash_fun.h:68:12: note: candidate found by name lookup is '__gn
u_cxx::hash'
538 struct hash { };
539 ^
>> 540 bed2vector.cpp:432:29: error: expected '>'
541 hash_map<string, int, hash<string>,equal_to<string> > cind_map;
542 ^
>> 543 bed2vector.cpp:476:29: error: reference to 'hash' is ambiguous
544 hash_map<string, int, hash<string>,equal_to<string> >::const_
iterator li=cind_map.find(chr);
545 ^
546 /usr/lib/gcc/aarch64-redhat-linux/8/../../../../include/c++/8/syste
m_error:142:12: note: candidate found by name lookup is 'std::hash'
547 struct hash;
548 ^
549 /usr/lib/gcc/aarch64-redhat-linux/8/../../../../include/c++/8/backw
ard/hash_fun.h:68:12: note: candidate found by name lookup is '__gn
u_cxx::hash'
550 struct hash { };
551 ^
552 fatal error: too many errors emitted, stopping now [-ferror-limit=]
553 1 warning and 20 errors generated.
>> 554 make: *** [/vol0003/rccs-sdt/data/a01008/spack-all-test/env-2024022
7/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/r-4.3.0-e2kmfv2xhv67e
5xxdvt4xlpswqw7q26t/rlib/R/etc/Makeconf.spack:198: bed2vector.o] Er
ror 1
555 ERROR: compilation failed for package 'spp'
556 * removing '/vol0003/rccs-sdt/data/a01008/spack-all-test/env-202402
27/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/r-phantompeakqualtoo
ls-1.14-hn2hwibimsttoypqkoe4qhijexgbppyj/rlib/R/library/spp'

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-r-phantompeakqualtools-1.14-hn2hwibimsttoypqkoe4qhijexgbppyj/spack-build-out.txt

==> Error: phantompeakqualtools-1.2-idm76qxxpulfe2t6kgx2hvssc44s5kdg: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).


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