List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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pmdk 1.12.1

Compiler Fujitsu Compiler Fujitsu C/C++ Compiler 4.10.0 tcsds-1.2.38
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
==> Warning: config:terminal_title has been replaced by install_status and is ignored
==> Warning: Failed to initialize repository: '$spack/var/spack/repos/local'.
No repo.yaml found in '$spack/var/spack/repos/local'
To remove the bad repository, run this command:
spack repo rm $spack/var/spack/repos/local
[+] /usr (external curl-7.61.1-qsvgylcys5hkzdnl2pdh4blrprxlsp5m)
[+] /usr (external ncurses-6.1-a6lc7oq2dlgphtibbpp6x72mqgmscros)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/zlib-ng-2.1.4-m4nsqgrityww4eqljits3svzi4wynus3
[+] /usr (external pkgconf-1.4.2-mmjuloqcob6vnd6bylwgum67waaa3kht)
[+] /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/cmake-3.27.7-ussgjuqkqbxi5dcv7kbp6bugdcjc5ph6
==> Installing pmdk-1.12.1-kwgwv4qenjxvp6rqzkdv3mhdztg72bo6 [6/6]
==> No binary for pmdk-1.12.1-kwgwv4qenjxvp6rqzkdv3mhdztg72bo6 found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/var/spack/cache/_source-cache/archive/53/53602e4c2439957046b428187665c5ff38cb90ca50956eb917b509a2e96909a3.tar.gz
==> No patches needed for pmdk
==> pmdk: Executing phase: 'install'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16' 'install' 'prefix=/vol0003/rccs-sdt/data/a01008/spack-all-test/env-20240227/spack/opt/spack/linux-rhel8-a64fx/fj-4.10.0/pmdk-1.12.1-kwgwv4qenjxvp6rqzkdv3mhdztg72bo6' 'EXTRA_CFLAGS=-Wno-error' 'NDCTL_ENABLE=n' 'BUILD_RPMEM=n' 'DOC=n' 'EXPERIMENTAL=n'

7 errors found in build log:
1381 ar rv ../debug/libpmem2/../libpmem2.a ../debug/libpmem2/libpmem2_a
ll.o
1382 ar: creating ../debug/libpmem2/../libpmem2.a
1383 a - ../debug/libpmem2/libpmem2_all.o
1384 -- Performing Test C_HAS__DDEBUG - Success
1385 -- Performing Test C_HAS__U_FORTIFY_SOURCE__D_FORTIFY_SOURCE_2
1386 /usr/bin/ld: ../debug/libpmem2/mcsafe_ops_posix.o(.debug_info+0x19
e): R_AARCH64_ABS64 used with TLS symbol Mcsafe_jmp
>> 1387 clang-7: error: linker command failed with exit code 1 (use -v to
see invocation)
>> 1388 make[2]: *** [../Makefile.inc:251: ../debug/libpmem2/../libpmem2.s
o.1.0.0] Error 1
1389 make[2]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/s
pack-stage/spack-stage-pmdk-1.12.1-kwgwv4qenjxvp6rqzkdv3mhdztg72bo
6/spack-src/src/libpmem2'
>> 1390 make[1]: *** [Makefile:149: libpmem2] Error 2
1391 make[1]: *** Waiting for unfinished jobs....
1392 warning: unknown warning option '-Wcast-function-type'; did you me
an '-Wbad-function-cast'? [-Wunknown-warning-option]
1393 1 warning generated.
1394 warning: unknown warning option '-Wcast-function-type'; did you me
an '-Wbad-function-cast'? [-Wunknown-warning-option]
1395 1 warning generated.
1396 warning: unknown warning option '-Wcast-function-type'; did you me
an '-Wbad-function-cast'? [-Wunknown-warning-option]

...

3125 a - ../debug/libpmemobj/libpmemobj_all.o
3126 /usr/bin/ld: ../debug/libpmemobj/lane.o(.debug_info+0x5e): R_AARCH
64_ABS64 used with TLS symbol Lane_info_ht
3127 /usr/bin/ld: ../debug/libpmemobj/lane.o(.debug_info+0x7e): R_AARCH
64_ABS64 used with TLS symbol Lane_info_records
3128 /usr/bin/ld: ../debug/libpmemobj/lane.o(.debug_info+0x11b): R_AARC
H64_ABS64 used with TLS symbol Lane_info_cache
3129 /usr/bin/ld: ../debug/libpmemobj/obj.o(.debug_info+0xe6): R_AARCH6
4_ABS64 used with TLS symbol _pobj_cached_pool
3130 /usr/bin/ld: ../debug/libpmemobj/tx.o(.debug_info+0x50): R_AARCH64
_ABS64 used with TLS symbol get_tx.tx
>> 3131 clang-7: error: linker command failed with exit code 1 (use -v to
see invocation)
>> 3132 make[2]: *** [../Makefile.inc:251: ../debug/libpmemobj/../libpmemo
bj.so.1.0.0] Error 1
3133 make[2]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/s
pack-stage/spack-stage-pmdk-1.12.1-kwgwv4qenjxvp6rqzkdv3mhdztg72bo
6/spack-src/src/libpmemobj'
>> 3134 make[1]: *** [Makefile:149: libpmemobj] Error 2
3135 [ 65%] Linking C executable ../out/vdm
3136 make[6]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/s
pack-stage/spack-stage-pmdk-1.12.1-kwgwv4qenjxvp6rqzkdv3mhdztg72bo
6/spack-src/src/deps/miniasync/build'
3137 [ 65%] Built target vdm
3138 make[6]: Entering directory '/vol0003/rccs-sdt/data/a01008/tmpdir/
spack-stage/spack-stage-pmdk-1.12.1-kwgwv4qenjxvp6rqzkdv3mhdztg72b
o6/spack-src/src/deps/miniasync/build'
3139 make[6]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/s
pack-stage/spack-stage-pmdk-1.12.1-kwgwv4qenjxvp6rqzkdv3mhdztg72bo
6/spack-src/src/deps/miniasync/build'
3140 make[6]: Entering directory '/vol0003/rccs-sdt/data/a01008/tmpdir/
spack-stage/spack-stage-pmdk-1.12.1-kwgwv4qenjxvp6rqzkdv3mhdztg72b
o6/spack-src/src/deps/miniasync/build'

...

3268 [100%] Built target example-hashmap
3269 make[5]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/s
pack-stage/spack-stage-pmdk-1.12.1-kwgwv4qenjxvp6rqzkdv3mhdztg72bo
6/spack-src/src/deps/miniasync/build'
3270 make[4]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/s
pack-stage/spack-stage-pmdk-1.12.1-kwgwv4qenjxvp6rqzkdv3mhdztg72bo
6/spack-src/src/deps/miniasync/build'
3271 make[3]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/s
pack-stage/spack-stage-pmdk-1.12.1-kwgwv4qenjxvp6rqzkdv3mhdztg72bo
6/spack-src/src/deps/miniasync'
3272 make[2]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/s
pack-stage/spack-stage-pmdk-1.12.1-kwgwv4qenjxvp6rqzkdv3mhdztg72bo
6/spack-src/src/deps'
3273 make[1]: Leaving directory '/vol0003/rccs-sdt/data/a01008/tmpdir/s
pack-stage/spack-stage-pmdk-1.12.1-kwgwv4qenjxvp6rqzkdv3mhdztg72bo
6/spack-src/src'
>> 3274 make: *** [Makefile:58: all] Error 2

See build log for details:
/data/rccs-sdt/a01008/tmpdir/spack-stage/spack-stage-pmdk-1.12.1-kwgwv4qenjxvp6rqzkdv3mhdztg72bo6/spack-build-out.txt


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